Evidence map›Paper›PMID 37545225›Full record

ArticleCancer biomarkers : section A of Disease markers2023

Immunological function and prognostic value of lymphoid-specific helicase in liver hepatocellular carcinoma.

Yuan Fang, Weiqiang Tang, Dan Zhao, Xiaoli Zhang, Na Li, Yang Yang, Li Jin, Zhitao Li, Benkai Wei, Yinglei Miao and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer biomarkers : section A of Disease markers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yuan FangOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Weiqiang TangInstitute of Clinical Medicine, The First Affiliated Hospital, Hengyang Medical School, University of South China, Hengyang, Hunan, China.
Dan ZhaoLaboratory of Oncogenes and Related Genes, Shanghai Cancer Institute, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Xiaoli ZhangGastrointestinal and Hernia Surgery, The First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Na LiOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Yang YangOtorhinolaryngology Head and Neck Surgery, Baoshan People's Hospital, Baoshang, Yunnan, China.
Li JinOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Zhitao LiOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Benkai WeiOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Yinglei MiaoDepartment of Gastroenterology, The First Affiliated Hospital of Kunming Medical University, Yunnan, China.
Zhong ZengOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Hanfei HuangOrgan Transplantation Center, the First Affiliated Hospital of Kunming Medical University, Kunming, Yunnan, China.
Kunming Medical University · CNBaoshan College · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLymphoid-specific helicase (HELLS), a SNF2-like chromatin-remodeling enzyme, plays a key role in tumor progression via its DNA methylation function. However, the effects of HELLS on immune infiltration and prognosis in liver hepatocellular carcinoma (LIHC) remain uncertain.

methodsThe Tumor Immune Estimation Resource (TIMER) database was employed to explore the pan-cancer mRNA expression of HELLS and its correlation with immunity. GEPIA2 was used to verify the correlation between HELLS expression and survival. The role of HELLS in cancer was explored via gene set enrichment analysis (Gene Ontology and Kyoto Encyclopedia of Genes and Genomes) and the construction of gene-gene and protein-protein interaction networks (PPI). Additionally, correlations between DNA methylation, HELLS expression, and immune-related genes were explored in LIHC. HELLS expression in LIHC clinical samples was determined using qRT-PCR and western blotting. The effects of downregulated HELLS expression in hepatocellular carcinoma cells was explored via transfection experiments in vitro.

resultsHigh HELLS mRNA expression was identified in several cancers and was significantly associated with poorer prognosis in LIHC. Furthermore, HELLS expression was positively correlated with tumor-infiltrating lymphocytes and immune checkpoint genes in LIHC. Bioinformatics analysis suggested that DNA methylation of HELLS may be associated with the immune response. Results from the TCGA-LIHC dataset, clinical samples, and functional analysis indicated that HELLS contributed to tumor progression in LIHC.

conclusionThe study findings demonstrate that HELLS is an important factor in promoting LIHC malignancy and might serve as a potential biomarker for LIHC.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularDNA HelicasesLiver NeoplasmsDNA MethylationGene Expression Regulation, NeoplasticHumansLymphocytes, Tumor-InfiltratingPrognosisBiomarkers, TumorDNA HelicasesHELLS protein, humanDNA methylationHELLSimmuneliver hepatocellular carcinomaprognosistumor-infiltrating

Identifiers

PMID37545225
PMCPMC12412859
OpenAlexW4385575347

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.