Evidence map›Paper›PMID 37542718›Full record

ArticleCell reports2023

MtrA modulates Mycobacterium tuberculosis cell division in host microenvironments to mediate intrinsic resistance and drug tolerance.

Eliza J R Peterson, Aaron N Brooks, David J Reiss, Amardeep Kaur, Julie Do, Min Pan, Wei-Ju Wu, Robert Morrison, Vivek Srinivas, Warren Carter and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Cefpiramide RestrictsACS medicinal chemistry letters · 2026
    Article
  3. Article
  4. Cell wall remodeling-dependent morphotype switch inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Tamoxifen inhibits histidine kinases ofMicrobiology spectrum · 2026
    Article
  6. Review
  7. Review
  8. Review
  9. Stage-associated enrichment ofFrontiers in veterinary science · 2026
    Article
  10. Article
  11. Article
  12. Netupitant Exhibits Potent Activity onACS infectious diseases · 2025
    Article
  13. Article
  14. International journal of molecular sciences · 2025
    Review
  15. Article
  16. Predicting fitness inFrontiers in tuberculosis · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Eliza J R PetersonInstitute for Systems Biology, Seattle, WA 98109, USA. Electronic address: eliza.peterson@isbscience.org.
Aaron N BrooksInstitute for Systems Biology, Seattle, WA 98109, USA.
David J ReissInstitute for Systems Biology, Seattle, WA 98109, USA.
Amardeep KaurInstitute for Systems Biology, Seattle, WA 98109, USA.
Julie DoInstitute for Systems Biology, Seattle, WA 98109, USA.
Min PanInstitute for Systems Biology, Seattle, WA 98109, USA.
Wei-Ju WuInstitute for Systems Biology, Seattle, WA 98109, USA.
Robert MorrisonLaboratory of Malaria, Immunology and Vaccinology, National Institute of Allergy and Infectious Diseases, NIH, Bethesda, MD 20892, USA.
Vivek SrinivasInstitute for Systems Biology, Seattle, WA 98109, USA.
Warren CarterInstitute for Systems Biology, Seattle, WA 98109, USA.
Mario L Arrieta-OrtizInstitute for Systems Biology, Seattle, WA 98109, USA.
Rene A RuizInstitute for Systems Biology, Seattle, WA 98109, USA.
Apoorva BhattSchool of Biosciences and Institute of Microbiology and Infection, University of Birmingham, Birmingham B15 2TT, UK.
Nitin S BaligaInstitute for Systems Biology, Seattle, WA 98109, USA; Departments of Biology and Microbiology, University of Washington, Seattle, WA 98195, USA; Molecular and Cellular Biology Program, University of Washington, Seattle, WA 98195, USA; Lawrence Berkeley National Lab, Berkeley, CA 94720, USA. Electronic address: nitin.baliga@isbscience.org.
Institute for Systems Biology · USLawrence Berkeley National Laboratory · USNational Institute of Allergy and Infectious Diseases · USUniversity of Birmingham · GB

Funding

Technology CoreU19AI135976 · NIAID · SEATTLE CHILDREN'S HOSPITAL · PI SHERMAN, DAVID R · 2018 to 2022
$17.0M
A systems analysis of drug tolerance in Mycobacterium tuberculosisR01AI128215 · NIAID · INSTITUTE FOR SYSTEMS BIOLOGY · PI Nitin S Baliga · 2017 to 2026
$8.8M
Site Specific Immunophenotyping Assays of COVID19 Patients to Align with NIAID National StudyR01AI141953 · NIAID · INSTITUTE FOR SYSTEMS BIOLOGY · PI BALIGA, NITIN S · 2019 to 2023
$5.7M
NIAID NIH HHS R01 AI128215NIAID NIH HHS R01 AI141953NIAID NIH HHS U19 AI135976
6 · The paper itself

Abstract

The success of Mycobacterium tuberculosis (Mtb) is largely attributed to its ability to physiologically adapt and withstand diverse localized stresses within host microenvironments. Here, we present a data-driven model (EGRIN 2.0) that captures the dynamic interplay of environmental cues and genome-encoded regulatory programs in Mtb. Analysis of EGRIN 2.0 shows how modulation of the MtrAB two-component signaling system tunes Mtb growth in response to related host microenvironmental cues. Disruption of MtrAB by tunable CRISPR interference confirms that the signaling system regulates multiple peptidoglycan hydrolases, among other targets, that are important for cell division. Further, MtrA decreases the effectiveness of antibiotics by mechanisms of both intrinsic resistance and drug tolerance. Together, the model-enabled dissection of complex MtrA regulation highlights its importance as a drug target and illustrates how EGRIN 2.0 facilitates discovery and mechanistic characterization of Mtb adaptation to specific host microenvironments within the host.

Indexed as

Mycobacterium tuberculosisTranscription FactorsBacterial ProteinsCell DivisionDrug ToleranceBacterial ProteinsTranscription FactorsCP: Microbiologydrug discoverygene regulatory networksMycobacteriasystems biologytranscriptional regulationtuberculosis

Identifiers

PMID37542718
PMCPMC10480492
OpenAlexW4385576865

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.