Evidence map›Paper›PMID 37542144›Full record

ArticleCommunications biology2023

Polymeric nature of tandemly repeated genes enhances assembly of constitutive heterochromatin in fission yeast.

Tetsuya Yamamoto, Takahiro Asanuma, Yota Murakami

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.3field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 2 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Tetsuya YamamotoInstitute for Chemical Reaction Design and Discovery, Hokkaido University, Sapporo, 001-0021, Hokkaido, Japan. tyamamoto@icredd.hokudai.ac.jp.ORCID 0000-0002-6786-8299
Takahiro AsanumaDepartment of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Hokkaido, Japan.
Yota MurakamiDepartment of Chemistry, Faculty of Science, Hokkaido University, Sapporo, 060-0810, Hokkaido, Japan.
Hokkaido University · JPHokkaido University of Science · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Motivated by our recent experiments that demonstrate that the tandemly repeated genes become heterochromatin, here we show a theory of heterochromatin assembly by taking into account the connectivity of these genes along the chromatin in the kinetic equations of small RNA production and histone methylation, which are the key biochemical reactions involved in the heterochromatin assembly. Our theory predicts that the polymeric nature of the tandemly repeated genes ensures the steady production of small RNAs because of the stable binding of nascent RNAs produced from the genes to RDRC/Dicers at the surface of nuclear membrane. This theory also predicts that the compaction of the tandemly repeated genes suppresses the production of small RNAs, consistent with our recent experiments. This theory can be extended to the small RNA-dependent gene silencing in higher organisms.

Indexed as

SchizosaccharomycesSchizosaccharomyces pombe ProteinsHeterochromatinRNA InterferenceRNA, Small InterferingHeterochromatinRNA, Small InterferingSchizosaccharomyces pombe Proteins

Identifiers

PMID37542144
PMCPMC10403545
OpenAlexW4385580530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.