Evidence map›Paper›PMID 37541656›Full record

ArticleApplied clinical informatics2023

POINT: Pipeline for Offline Conversion and Integration of Geocodes and Neighborhood Data.

Kevin Guo, Allison B McCoy, Thomas J Reese, Adam Wright, Samuel Trent Rosenbloom, Siru Liu, Elise M Russo, Bryan D Steitz

Abstract read
In one paragraph

Article in Applied clinical informatics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kevin GuoSchool of Medicine, Vanderbilt University, Nashville, Tennessee, United States.
Allison B McCoyDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Thomas J ReeseDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Adam WrightDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Samuel Trent RosenbloomDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Siru LiuDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Elise M RussoDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.
Bryan D SteitzDepartment of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee, United States.

Funding

Safety Promotion through Early Event Detection in the Elderly (SPEEDe)R01AG062499 · NIA · VANDERBILT UNIVERSITY MEDICAL CENTER · PI WRIGHT, ADAM T · 2019 to 2023
$3.5M
NIA NIH HHS R01 AG062499NIA NIH HHS R01AG062499
6 · The paper itself

Abstract

objectivesGeocoding, the process of converting addresses into precise geographic coordinates, allows researchers and health systems to obtain neighborhood-level estimates of social determinants of health. This information supports opportunities to personalize care and interventions for individual patients based on the environments where they live. We developed an integrated offline geocoding pipeline to streamline the process of obtaining address-based variables, which can be integrated into existing data processing pipelines.

methodsPOINT is a web-based, containerized, application for geocoding addresses that can be deployed offline and made available to multiple users across an organization. Our application supports use through both a graphical user interface and application programming interface to query geographic variables, by census tract, without exposing sensitive patient data. We evaluated our application's performance using two datasets: one consisting of 1 million nationally representative addresses sampled from Open Addresses, and the other consisting of 3,096 previously geocoded patient addresses.

resultsA total of 99.4 and 99.8% of addresses in the Open Addresses and patient addresses datasets, respectively, were geocoded successfully. Census tract assignment was concordant with reference in greater than 90% of addresses for both datasets. Among successful geocodes, median (interquartile range) distances from reference coordinates were 52.5 (26.5-119.4) and 14.5 (10.9-24.6) m for the two datasets.

conclusionPOINT successfully geocodes more addresses and yields similar accuracy to existing solutions, including the U.S. Census Bureau's official geocoder. Addresses are considered protected health information and cannot be shared with common online geocoding services. POINT is an offline solution that enables scalability to multiple users and integrates downstream mapping to neighborhood-level variables with a pipeline that allows users to incorporate additional datasets as they become available. As health systems and researchers continue to explore and improve health equity, it is essential to quickly and accurately obtain neighborhood variables in a Health Insurance Portability and Accountability Act (HIPAA)-compliant way.

Indexed as

Geographic Information SystemsGeographic MappingHumansResidence CharacteristicsSoftware

Identifiers

PMID37541656
PMCPMC10584391

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.