Evidence map›Paper›PMID 37538003›Full record

ArticleEMBO molecular medicine2023

Deconvoluting gene and environment interactions to develop an "epigenetic score meter" of disease.

Alessio Butera, Lena Smirnova, Elisa Ferrando-May, Thomas Hartung, Thomas Brunner, Marcel Leist, Ivano Amelio

Abstract read
In one paragraph

Article in EMBO molecular medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Alessio ButeraChair for Systems Toxicology, University of Konstanz, Konstanz, Germany.ORCID 0000-0001-7196-4235
Lena SmirnovaCenter for Alternatives to Animal Testing, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA.
Elisa Ferrando-MayDeutsches Krebsforschungszentrum (DKFZ), Heidelberg, Germany.ORCID 0000-0002-5567-8690
Thomas HartungCenter for Alternatives to Animal Testing, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD, USA.
Thomas BrunnerChair for in Biochemical Pharmacology, University of Konstanz, Konstanz, Germany.ORCID 0000-0002-1594-4712
Marcel LeistChair for in vitro Toxicology and Biomedicine, Inaugurated by the Doerenkamp-Zbinden Foundation, University of Konstanz, Konstanz, Germany.ORCID 0000-0002-3778-8693
Ivano AmelioChair for Systems Toxicology, University of Konstanz, Konstanz, Germany.ORCID 0000-0002-9126-5391

Funding

GEARs Combining advances in Genomics and Environmental science to accelerate Actionable Research and practice in ASDR01ES034554 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI Christine Ladd-Acosta, HEATHER E VOLK · 2022 to 2026
$9.7M
NIEHS NIH HHS R01 ES034554
6 · The paper itself

Abstract

Human health is determined both by genetics (G) and environment (E). This is clearly illustrated in groups of individuals who are exposed to the same environmental factor showing differential responses. A quantitative measure of the gene-environment interactions (GxE) effects has not been developed and in some instances, a clear consensus on the concept has not even been reached; for example, whether cancer is predominantly emerging from "bad luck" or "bad lifestyle" is still debated. In this article, we provide a panel of examples of GxE interaction as drivers of pathogenesis. We highlight how epigenetic regulations can represent a common connecting aspect of the molecular bases. Our argument converges on the concept that the GxE is recorded in the cellular epigenome, which might represent the key to deconvolute these multidimensional intricated layers of regulation. Developing a key to decode this epigenetic information would provide quantitative measures of disease risk. Analogously to the epigenetic clock introduced to estimate biological age, we provocatively propose the theoretical concept of an "epigenetic score-meter" to estimate disease risk.

Indexed as

Gene-Environment InteractionNeoplasmsEpigenesis, GeneticHumans

Identifiers

PMID37538003
PMCPMC10493573

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.