ArticleScientific data2023
Chromosome-scale genomes of commercial timber trees (Ochroma pyramidale, Mesua ferrea, and Tectona grandis).
Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- "A genome assembly of the California flannelbush, Fremontodendron californicum".The Journal of heredity · 2026Article
- Unraveling the Genome of Epidendrum Fulgens: Demographic History and Gene Family Dynamics in a Resilient Neotropical Orchid.Genome biology and evolution · 2026Article
- Unraveling the genetic diversity and population structure of Mesua ferrea L. Through RAPD and ISSR markers for effective conservation.Journal, genetic engineering & biotechnology · 2026Article
- Base Editing-Mediated Targeted Evolution of Populus CesA8 Boosts Cellulose Production.Plant biotechnology journal · 2026Article
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- Next-generation SNPs from lignin biosynthesis gene and transcription factors reveal a hidden teak (Frontiers in genetics · 2026Article
- A haplotype-resolved gap-free chromosome assembly of the threatened plant Paradombeya sinensis.Scientific data · 2025Article
- Reticulate allopolyploidy and subsequent dysploidy drive evolution and diversification in the cotton family.Nature communications · 2025Article
- The China National GeneBank Sequence Archive (CNSA) 2024 update.Horticulture research · 2025Article
- A nearly telomere-to-telomere diploid genome assembly of Firmiana kwangsiensis, a threatened species in China.Scientific data · 2024Article
- Beyond NGS data sharing for plant ecological resilience and improvement of agronomic traits.Scientific data · 2024Article
- Subgenome-aware analyses reveal the genomic consequences of ancient allopolyploid hybridizations throughout the cotton family.Proceedings of the National Academy of Sciences of the United States of America · 2024Article
- Chromosome-scale genomes of commercially important mahoganies, Swietenia macrophylla and Khaya senegalensis.Scientific data · 2023Article
- Genome Assembly ofInternational journal of molecular sciences · 2023Article
- Chromosome-scale genomes of five Hongmu species in Leguminosae.Scientific data · 2023Article
- Chromosome-scale genome of Indian rosewood (Frontiers in plant science · 2023Article
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Authors and funding
24 authors.
Funding
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Abstract
Wood is the most important natural and endlessly renewable source of energy. Despite the ecological and economic importance of wood, many aspects of its formation have not yet been investigated. We performed chromosome-scale genome assemblies of three timber trees (Ochroma pyramidale, Mesua ferrea, and Tectona grandis) which exhibit different wood properties such as wood density, hardness, growth rate, and fiber cell wall thickness. The combination of 10X, stLFR, Hi-Fi sequencing and HiC data led us to assemble high-quality genomes evident by scaffold N50 length of 55.97 Mb (O. pyramidale), 22.37 Mb (M. ferrea) and 14.55 Mb (T. grandis) with >97% BUSCO completeness of the assemblies. A total of 35774, 24027, and 44813 protein-coding genes were identified in M. ferrea, T. grandis and O. pyramidale, respectively. The data generated in this study is anticipated to serve as a valuable genetic resource and will promote comparative genomic analyses, and it is of practical importance in gaining a further understanding of the wood properties in non-model woody species.
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