Evidence map›Paper›PMID 37537157›Full record

ArticleNature communications2023

ERFVII action and modulation through oxygen-sensing in Arabidopsis thaliana.

Agata Zubrycka, Charlene Dambire, Laura Dalle Carbonare, Gunjan Sharma, Tinne Boeckx, Kamal Swarup, Craig J Sturrock, Brian S Atkinson, Ranjan Swarup, Françoise Corbineau and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
24.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Review
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  7. HNature · 2026
    Article
  8. Review
  9. A synthetic ERFVII-dependent circuit in yeast sheds light on the regulation of early hypoxic responses of plants.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  10. Plastid-to-nucleus communication under hypoxia involves group VII ethylene response factors inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Oxygen sensing and plant adaptation to flooding in a changing climate.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  17. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Agata Zubrycka *School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.ORCID http://orcid.org/0009-0008-9197-5677
Charlene Dambire *School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Laura Dalle Carbonare *School of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Gunjan SharmaSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.ORCID http://orcid.org/0000-0001-5304-8081
Tinne BoeckxSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Kamal SwarupSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Craig J SturrockSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Brian S AtkinsonSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Ranjan SwarupSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK.
Françoise CorbineauUMR 7622 CNRS-UPMC, Biologie du développement, Institut de Biologie Paris Seine, Sorbonne Université, Paris, France.
Neil J OldhamSchool of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, UK.
Michael J HoldsworthSchool of Biosciences, University of Nottingham, LE12 5RD, Loughborough, UK. michael.holdsworth@nottingham.ac.uk.ORCID http://orcid.org/0000-0002-3954-9215
University of Nottingham · GBCentre National de la Recherche Scientifique · FR

Funding

Biotechnology and Biological Sciences Research Council BB/R002428/1
6 · The paper itself

Abstract

Oxygen is a key signalling component of plant biology, and whilst an oxygen-sensing mechanism was previously described in Arabidopsis thaliana, key features of the associated PLANT CYSTEINE OXIDASE (PCO) N-degron pathway and Group VII ETHYLENE RESPONSE FACTOR (ERFVII) transcription factor substrates remain untested or unknown. We demonstrate that ERFVIIs show non-autonomous activation of root hypoxia tolerance and are essential for root development and survival under oxygen limiting conditions in soil. We determine the combined effects of ERFVIIs in controlling gene expression and define genetic and environmental components required for proteasome-dependent oxygen-regulated stability of ERFVIIs through the PCO N-degron pathway. Using a plant extract, unexpected amino-terminal cysteine sulphonic acid oxidation level of ERFVIIs was observed, suggesting a requirement for additional enzymatic activity within the pathway. Our results provide a holistic understanding of the properties, functions and readouts of this oxygen-sensing mechanism defined through its role in modulating ERFVII stability.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantOxygenPlantsTranscription FactorsArabidopsis ProteinsOxygenTranscription Factors

Identifiers

PMID37537157
PMCPMC10400637
OpenAlexW4385546266

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.