Evidence map›Paper›PMID 37536918›Full record

ArticleJournal of medical genetics2023

Prevalence and clinical implications of germline pathogenic variants in cancer predisposing genes in young patients across sarcoma subtypes.

Nathalia de Angelis de Carvalho, Karina Miranda Santiago, Joyce Maria Lisboa Maia, Felipe D'Almeida Costa, Maria Nirvana Formiga, Diogo Cordeiro de Queiroz Soares, Daniele Paixão, Celso Abdon Lopes de Mello, Cecilia Maria Lima da Costa, José Claudio Casali da Rocha and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of medical genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Observational
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 3 countries.

Nathalia de Angelis de CarvalhoClinical and Functional Genomics Group, ACCamargo Cancer Center, Sao Paulo, São Paulo, Brazil.
Karina Miranda SantiagoClinical and Functional Genomics Group, ACCamargo Cancer Center, Sao Paulo, São Paulo, Brazil.ORCID 0000-0002-6326-7795
Joyce Maria Lisboa MaiaClinical Oncology Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Felipe D'Almeida CostaDepartment of Anatomic Pathology, ACCamargo Cancer Center, Sao Paulo, Brazil.
Maria Nirvana FormigaOncogenetics Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Diogo Cordeiro de Queiroz SoaresOncogenetics Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Daniele PaixãoOncogenetics Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Celso Abdon Lopes de MelloClinical Oncology Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Cecilia Maria Lima da CostaPediatric Oncology Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
José Claudio Casali da RochaOncogenetics Department, ACCamargo Cancer Center, Sao Paulo, Brazil.
Barbara RiveraMolecular Mechanisms and Experimental Therapy in Oncology Program, IDIBELL, Barcelona, Spain.ORCID 0000-0001-9434-6288
Dirce Maria CarraroClinical and Functional Genomics Group, ACCamargo Cancer Center, Sao Paulo, São Paulo, Brazil.
Giovana Tardin TorrezanClinical and Functional Genomics Group, ACCamargo Cancer Center, Sao Paulo, São Paulo, Brazil giovana.torrezan@accamargo.org.br.ORCID 0000-0002-8659-5329
AC Camargo Hospital · BRInstitut d'Investigació Biomédica de Bellvitge · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSarcomas are a rare and diverse group of cancers occurring mainly in young individuals for which an underlying germline genetic cause remains unclear in most cases.

methodsGermline DNA from 177 children, adolescents and young adults with soft tissue or bone sarcomas was tested using multigene panels with 113 or 126 cancer predisposing genes (CPGs) to describe the prevalence of germline pathogenic/likely pathogenic variants (GPVs). Subsequent testing of a subset of tumours for loss of heterozygosity (LOH) evaluation was performed to investigate the clinical and molecular significance of these variants.

resultsGPVs were detected in 21.5% (38/177) of the patients (15.8% in children and 21.6% in adolescents and young adults), with dominant CPGs being altered in 15.2% overall. These variants were found in genes previously associated with the risk of developing sarcomas (

conclusionOur findings reveal that a high proportion of young patients with sarcomas presented a GPV in a CPG, underscoring the urgency of establishing appropriate genetic screening strategies for these individuals and their families.

Indexed as

Genetic Predisposition to DiseaseSarcomaAdolescentChildDNA HelicasesGerm CellsGerm-Line MutationHumansPrevalenceXeroderma Pigmentosum Group D ProteinYoung AdultDNA HelicasesERCC2 protein, humanFANCM protein, humanXeroderma Pigmentosum Group D Proteingenetic predisposition to diseasegenetic variationneoplasms

Identifiers

PMID37536918
PMCPMC10803955
OpenAlexW4385542300

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.