Evidence map›Paper›PMID 37536341›Full record

ArticleCell chemical biology2023

Arabinose- and xylose-modified analogs of 2',3'-cGAMP act as STING agonists.

Wei Xie, Lodoe Lama, Xuejing Yang, Vitaly Kuryavyi, Shibani Bhattacharya, Ilona Nudelman, Guangli Yang, Ouathek Ouerfelli, J Fraser Glickman, Roger A Jones and 2 more

Open access · greenAbstract read
In one paragraph

Article in Cell chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Extracellular cGAMP in health and disease.Molecular biomedicine · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Wei XieStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA; College of Pharmaceutical Sciences, Zhejiang University, Hangzhou 310058, China.
Lodoe LamaLaboratory of RNA Molecular Biology, The Rockefeller University, New York, NY 10065, USA.
Xuejing YangMolecular Pharmacology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Vitaly KuryavyiStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Shibani BhattacharyaNMR Laboratory, New York Structural Biology Center, New York, NY 10027, USA.
Ilona NudelmanHigh-Throughput and Spectroscopy Resource Center, The Rockefeller University, New York, NY 10065, USA.
Guangli YangOrganic Synthesis Core Facility, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
Ouathek OuerfelliOrganic Synthesis Core Facility, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA.
J Fraser GlickmanHigh-Throughput and Spectroscopy Resource Center, The Rockefeller University, New York, NY 10065, USA.
Roger A JonesDepartment of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, NJ 08854, USA. Electronic address: r.jones@rutgers.edu.
Thomas TuschlLaboratory of RNA Molecular Biology, The Rockefeller University, New York, NY 10065, USA. Electronic address: ttuschl@rockefeller.edu.
Dinshaw J PatelStructural Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10065, USA. Electronic address: pateld@mskcc.org.
Memorial Sloan Kettering Cancer Center · USRockefeller University · USNew York Structural Biology Center · USRutgers, The State University of New Jersey · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI STEVEN E EALICK · 2018 to 2026
$34.2M
Project 9P50GM103368 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI SHARPLESS, KARL BARRY · 2012 to 2016
$20.0M
Synthesis of alkylthio derivatized DNA &RNA fragmentsP01GM066671 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI ARNOLD, EDWARD V · 2002 to 2006
$5.0M
Development of small molecule cGAS inhibitors for repression of dsDNA-triggered interferon expressionR01AI141507 · NIAID · ROCKEFELLER UNIVERSITY · PI TUSCHL, THOMAS · 2019 to 2022
$2.1M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Structure-Activity Based Mechanistic Insights into Cleavage Chemistry by Self-Cleaving Nucleolytic RibozymesR01GM145888 · NIGMS · SLOAN-KETTERING INST CAN RESEARCH · PI PATEL, DINSHAW J · 2022 to 2025
$1.3M
Probing RNA Metal Binding with Specifically Labeled RNAR01GM079760 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI JONES, ROGER A · 2007 to 2010
$1.2M
475 MHz NMR SpectrometerS10OD023499 · OD · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PALMER, ARTHUR G · 2017 to 2017
$925k
PROBING RNA METAL BINDING WITH SPECIFICALLY LABELED RNAR01EB002809 · NIBIB · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI JONES, ROGER A · 2003 to 2003
$237k
NCI NIH HHS P30 CA008748NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI141507NIBIB NIH HHS R01 EB002809NIGMS NIH HHS P01 GM066671NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P50 GM103368NIGMS NIH HHS R01 GM079760NIGMS NIH HHS R01 GM145888NIH HHS S10 OD023499
6 · The paper itself

Abstract

Stimulator of interferon genes (STING) agonists are promising candidates for vaccine adjuvants and antitumor immune stimulants. The most potent natural agonist of STING, 2',3'-cyclic GMP-AMP (2',3'-cGAMP), is subject to nuclease-mediated inherent metabolic instability, thereby placing limits on its clinical efficacy. Here, we report on a new class of chemically synthesized sugar-modified analogs of 2',3'-cGAMP containing arabinose and xylose sugar derivatives that bind mouse and human STING alleles with high affinity. The co-crystal structures demonstrate that such analogs act as 2',3'-cGAMP mimetics that induce the "closed" conformation of human STING. These analogs show significant resistance to hydrolysis mediated by ENPP1 and increased stability in human serum, while retaining similar potency as 2',3'-cGAMP at inducing IFN-β secretion from human THP1 cells. The arabinose- and xylose-modified 2',3'-cGAMP analogs open a new strategy for overcoming the inherent nuclease-mediated vulnerability of natural ribose cyclic nucleotides, with the additional benefit of high translational potential as cancer therapeutics and vaccine adjuvants.

Indexed as

ArabinoseXyloseAdjuvants, VaccineAnimalsHumansMiceNucleotides, CyclicAdjuvants, VaccineArabinosecyclic guanosine monophosphate-adenosine monophosphateNucleotides, CyclicXylose2′,3′-cGAMPanalogs targeting STINGarabinose and xylose analogscancer therapeuticsresistance to ENPP1stability in human serumvaccine adjuvants

Identifiers

PMID37536341
PMCPMC10808274
OpenAlexW4385497520

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.