Evidence map›Paper›PMID 37534599›Full record

ArticleAnalytical chemistry2023

Characterization of an Omnitrap-Orbitrap Platform Equipped with Infrared Multiphoton Dissociation, Ultraviolet Photodissociation, and Electron Capture Dissociation for the Analysis of Peptides and Proteins.

Athanasios Smyrnakis, Nikita Levin, Mariangela Kosmopoulou, Ajay Jha, Kyle Fort, Alexander Makarov, Dimitris Papanastasiou, Shabaz Mohammed

Abstract read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Investigating the Efficiency of Ultraviolet Photodissociation in Peptides Modified withJournal of the American Society for Mass Spectrometry · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Top-Down and Middle-Down Mass Spectrometry of Antibodies.Molecular & cellular proteomics : MCP · 2025
    Review
  9. Article
  10. Proteomic Investigation of Immune Checkpoints and Some of Their Inhibitors.International journal of molecular sciences · 2024
    Review
  11. Review
  12. Review
  13. Top-down proteomics.Nature reviews. Methods primers · 2024
    Article
  14. Review
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Athanasios SmyrnakisFasmatech Science & Technology, Lefkippos Tech. Park, NCSR Demokritos, 15341 Agia Paraskevi, Greece.ORCID 0000-0003-1677-4214
Nikita LevinRosalind Franklin Institute, Harwell Campus, OX11 0QX Didcot, U.K.
Mariangela KosmopoulouFasmatech Science & Technology, Lefkippos Tech. Park, NCSR Demokritos, 15341 Agia Paraskevi, Greece.
Ajay JhaRosalind Franklin Institute, Harwell Campus, OX11 0QX Didcot, U.K.ORCID 0000-0002-4489-518X
Kyle FortThermo Fisher Scientific, 28199 Bremen, Germany.
Alexander MakarovThermo Fisher Scientific, 28199 Bremen, Germany.ORCID 0000-0002-7046-6709
Dimitris PapanastasiouFasmatech Science & Technology, Lefkippos Tech. Park, NCSR Demokritos, 15341 Agia Paraskevi, Greece.ORCID 0000-0003-2299-9479
Shabaz MohammedRosalind Franklin Institute, Harwell Campus, OX11 0QX Didcot, U.K.ORCID 0000-0003-2640-9560

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe an instrument configuration based on the Orbitrap Exploris 480 mass spectrometer that has been coupled to an Omnitrap platform. The Omnitrap possesses three distinct ion-activation regions that can be used to perform resonant-based collision-induced dissociation, several forms of electron-associated fragmentation, and ultraviolet photodissociation. Each section can also be combined with infrared multiphoton dissociation. In this work, we demonstrate all these modes of operation in a range of peptides and proteins. The results show that this instrument configuration produces similar data to previous implementations of each activation technique and at similar efficiency levels. We demonstrate that this unique instrument configuration is extremely versatile for the investigation of polypeptides.

Indexed as

ElectronsPeptidesMass SpectrometryProteinsResearch DesignPeptidesProteins

Identifiers

PMID37534599
PMCPMC10433246

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.