Evidence map›Paper›PMID 37533068›Full record

ArticleJournal of biological engineering2023

Comparative transcriptome findings reveal the neuroinflammatory network and potential biomarkers to early detection of ischemic stroke.

Jiefeng Luo, Dingzhi Chen, Yujia Mei, Hepeng Li, Biyun Qin, Xiao Lin, Ting Fung Chan, Keng Po Lai, Deyan Kong

Open access · goldAbstract read
In one paragraph

Article in Journal of biological engineering, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Jiefeng Luo *Department of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China. drljf98@163.com.
Dingzhi Chen *Department of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China.
Yujia MeiDepartment of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China.
Hepeng LiDepartment of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China.
Biyun QinDepartment of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China.
Xiao LinDepartment of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, USA.
Ting Fung ChanSchool of Life Sciences, State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Hong Kong SAR, China.
Keng Po LaiClinical Medicine Research Center, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, P. R. China. laikp_hospital@126.com.
Deyan KongDepartment of Neurology, The Second Affiliated Hospital of Guangxi Medical University, No 166 Dadaxuedong Road, Nanning, Guangxi, 530007, People's Republic of China. kongdeyan@gxmu.edu.cn.
Guangxi Medical University · CNChinese University of Hong Kong · CNIcahn School of Medicine at Mount Sinai · US

Funding

National Natural Science Foundation of China 81801361Natural Science Foundation of Guangxi Province 2023GXNSFAA026193Natural Science Foundation of Guangxi Province 2023GXNSFAA026197
6 · The paper itself

Abstract

introductionIschemic stroke accounts for 70-80% of all stroke cases, leading to over two million people dying every year. Poor diagnosis and late detection are the major causes of the high death and disability rate.

methodsIn the present study, we used the middle cerebral artery occlusion (MCAO) rat model and applied comparative transcriptomic analysis, followed by a systematic advanced bioinformatic analysis, including gene ontology enrichment analysis and Ingenuity Pathway Analysis (IPA). We aimed to identify novel biomarkers for the early detection of ischemic stroke. In addition, we aimed to delineate the molecular mechanisms underlying the development of ischemic stroke, in which we hoped to identify novel therapeutic targets for treating ischemic stroke.

resultsIn the comparative transcriptomic analysis, we identified 2657 differentially expressed genes (DEGs) in the brain tissue of the MCAO model. The gene enrichment analysis highlighted the importance of these DEGs in oxygen regulation, neural functions, and inflammatory and immune responses. We identified the elevation of angiopoietin-2 and leptin receptor as potential novel biomarkers for early detection of ischemic stroke. Furthermore, the result of IPA suggested targeting the inflammasome pathway, integrin-linked kinase signaling pathway, and Th1 signaling pathway for treating ischemic stroke.

conclusionThe results of the present study provide novel insight into the biomarkers and therapeutic targets as potential treatments of ischemic stroke.

Indexed as

BiomarkersIschemic strokeNeuroinflammationTherapeutic targetsTranscriptome analysis

Identifiers

PMID37533068
PMCPMC10398984
OpenAlexW4385490316

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.