Evidence map›Paper›PMID 37531459›Full record

ArticleScience advances2023

Illuminating the inner workings of a natural protein switch: Blue-light sensing in LOV-activated diguanylate cyclases.

Uršula Vide, Dženita Kasapović, Maximilian Fuchs, Martin P Heimböck, Massimo G Totaro, Elfriede Zenzmaier, Andreas Winkler

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Optogenetic enzymes: A deep dive into design and impact.Current opinion in structural biology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. ESM-scan-A tool to guide amino acid substitutions.Protein science : a publication of the Protein Society · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Uršula VideInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.ORCID 0000-0001-7024-5028
Dženita KasapovićInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Maximilian FuchsInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.ORCID 0009-0000-5747-2082
Martin P HeimböckInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Massimo G TotaroInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.ORCID 0000-0002-0277-1410
Elfriede ZenzmaierInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.
Andreas WinklerInstitute of Biochemistry, Graz University of Technology, Petersgasse 12/II, 8010 Graz, Austria.ORCID 0000-0001-6221-9671
Graz University of Technology · AT

Funding

Austrian Science Fund FWF P 34387
6 · The paper itself

Abstract

Regulatory proteins play a crucial role in adaptation to environmental cues. Especially for lifestyle transitions, such as cell proliferation or apoptosis, switch-like characteristics are desirable. While nature frequently uses regulatory circuits to amplify or dampen signals, stand-alone protein switches are interesting for applications like biosensors, diagnostic tools, or optogenetics. However, such stand-alone systems frequently feature limited dynamic and operational ranges and suffer from slow response times. Here, we characterize a LOV-activated diguanylate cyclase (LadC) that offers precise temporal and spatial control of enzymatic activity with an exceptionally high dynamic range over four orders of magnitude. To establish this pronounced activation, the enzyme exhibits a two-stage activation process in which its activity is inhibited in the dark by caging its effector domains and stimulated upon illumination by the formation of an extended coiled-coil. These switch-like characteristics of the LadC system can be used to develop new optogenetic tools with tight regulation.

Indexed as

Escherichia coli ProteinsLightOptogeneticsPhosphorus-Oxygen LyasesPhotic Stimulationdiguanylate cyclaseEscherichia coli ProteinsPhosphorus-Oxygen Lyases

Identifiers

PMID37531459
PMCPMC10396304
OpenAlexW4385505975

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.