Evidence map›Paper›PMID 37530723›Full record

ArticleBioscience reports2023

Network pharmacology analysis combined with experimental validation to explore the therapeutic mechanism of salidroside on intestine ischemia reperfusion.

Feng Chen, Yi-Hong Chai, Fa Zhang, Yong-Qiang Liu, Yan Zhang, Ya-Jing Shi, Jian-Ming Zhang, Yu-Fang Leng

Open access · goldAbstract read
In one paragraph

Article in Bioscience reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Feng ChenThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.ORCID 0000-0002-3764-1800
Yi-Hong ChaiThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
Fa ZhangDepartment of Urology, Gansu Provincial Hospital, Lanzhou, Gansu, China.
Yong-Qiang LiuThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
Yan ZhangThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
Ya-Jing ShiThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
Jian-Ming ZhangThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
Yu-Fang LengThe First Clinical Medical College of Lanzhou University, Lanzhou, 730000, GanSu Province, China.
First Hospital of Lanzhou University · CNLanzhou University · CNGansu Provincial Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ethnopharmacological relevanceSalidroside (SAL), a phenolic natural product present in Rhodiola rosea, are commonly used in the treatment of various ischemic-hypoxic diseases, including intestinal ischemia-reperfusion (IR) injury. However, their efficacy and potential mechanisms in the treatment of intestinal IR injury have not been investigated.

objectiveThe objective of the present study is to investigate the pharmacological mechanism of action of SAL on intestinal IR injury using a network pharmacology approach combined with experimental validation.

methodsIn the present study, we used the Traditional Chinese Medicine Systematic Pharmacology (TCMSP) database and analysis platform and Comparative Toxicogenomics Database (CTD) to predict possible target genes of SAL, collected relevant target genes of intestinal IR injury from GeneCards and DisGenet websites, and collected summary data to screen common target genes. Then, the protein-protein interaction (PPI) target network was constructed and analyzed by STRING database and Cytoscape 3.8.2 with the above intersecting genes. Then, gene ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were performed and the component-target-pathway network was constructed, followed by the use of molecular docking and molecular dynamic simulation to verify the possible binding conformation between SAL and candidate targets to further explore the potential targets of SAL in the treatment of intestinal IR injury. Finally, an in vivo model of mouse superior mesenteric artery ligation was established to assess the anti-intestinal IR injury effect of SAL by assessing histopathological changes in mouse small intestine by HE staining, detecting inflammatory factor expression by ELISA kit, and detecting the expression of key protein targets by Western blotting.

resultsA total of 166 SAL target genes and 1740 disease-related targets were retrieved, and 88 overlapping proteins were obtained as potential therapeutic targets. The pathway enrichment analysis revealed that the pharmacological effects of SAL on intestinal IR injury were anti-hypoxic, anti-inflammatory and metabolic pathway related, and the molecular docking and molecular dynamic simulation results showed that the core bioactive components had good binding affinity for TXNIP and AMPK, and the immunoblotting results indicated that the expression levels of TXNIP and AMPK in the small intestinal tissues of mice in the drug-treated group compared with the model group were significantly changed.

conclusionSAL may target AMPK and TXNIP domains to act as a therapeutic agent for intestinal IR. These findings comprehensively reveal the potential therapeutic targets for SAL against intestinal IR and provide theoretical basis for the clinical application of SAL in the treatment of intestinal IR.

Indexed as

Drugs, Chinese HerbalReperfusion InjuryAMP-Activated Protein KinasesAnimalsGlucosidesMiceMolecular Docking SimulationNetwork PharmacologyPhenolsReperfusionAMP-Activated Protein KinasesDrugs, Chinese HerbalGlucosidesPhenolsrhodiolosideinflammationintestinal ischemia-reperfusion injurynetwork pharmacologySalidroside

Identifiers

PMID37530723
PMCPMC10462912
OpenAlexW4385476383

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.