Evidence map›Paper›PMID 37530275›Full record

ArticleIndian journal of ophthalmology2023

A rare optineurin mutation in an Indian family with coexistence of JOAG and PCG.

Manoj Yadav, Anshu Yadav, Aarti Bhardwaj, Chand Singh Dhull, Sumit Sachdeva, Ritu Yadav, Mukesh Tanwar

Open access · diamondAbstract read
In one paragraph

Article in Indian journal of ophthalmology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Manoj YadavDepartment of Genetics, Maharshi Dayanand University, Rohtak, Harayana, India.
Anshu YadavDepartment of Genetics, Maharshi Dayanand University, Rohtak, Harayana, India.
Aarti BhardwajDepartment of Genetics, Maharshi Dayanand University, Rohtak, Harayana, India.
Chand Singh DhullRegional Institute of Ophthalmology, Pt. B.D. Sharma University of Health Sciences, Rohtak, Haryana, India.
Sumit SachdevaRegional Institute of Ophthalmology, Pt. B.D. Sharma University of Health Sciences, Rohtak, Haryana, India.
Ritu YadavDepartment of Genetics, Maharshi Dayanand University, Rohtak, Harayana, India.
Mukesh TanwarDepartment of Genetics, Maharshi Dayanand University, Rohtak, Harayana, India.
Creative Commons · USPandit Bhagwat Dayal Sharma University of Health Sciences · INMaharshi Dayanand University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: This study focused on the genetic screening of Myocilin (MYOC), Cytochrome P450 family 1 subfamily B member 1 (CYP1B1), Optineurin (OPTN), and SIX homeobox 6 (SIX6) genes in a family with coexistence of primary congenital glaucoma (PCG) and juvenile open-angle glaucoma (JOAG). Methods: Sanger sequencing was used to examine the coding region of all four genes. Six different online available algorithms were used for the pathogenicity prediction of missense variant. Structural analysis was done using Garnier-Osguthorpe-Robson (GOR), PyMol, ChimeraX, and Molecular Dynamic (MD) Simulations (using Graphics Processing Unit (GPU)-enabled Desmond module of Schrödinger). Results: There were a total of three sequence variants within the family. All seven algorithms determined that a single mutation, G538E, in the OPTN gene is pathogenic. The loops connecting the strands became more flexible, as predicted structurally and functionally by pathogenic mutations. Mutations create perturbations and conformational rearrangements in proteins, hence impairing their functioning. Conclusion: In this study, we describe a North Indian family in which members were having JOAG and PCG due to a rare homozygous/heterozygous mutation in OPTN. The coexistence of two types of glaucoma within a single pedigree suggests that certain OPTN mutations may be responsible for the onset of different glaucoma phenotypes.

Indexed as

GlaucomaGlaucoma, Open-AngleDNA Mutational AnalysisEye ProteinsGenetic TestingHumansMutationPedigreeEye ProteinsCytochrome P450juvenile open-angle glaucomamyocilinoptineurinprimary congenital glaucoma

Identifiers

PMID37530275
PMCPMC10538844
OpenAlexW4385466078

What OpenQuestion holds

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LicenceCC BY-NC-SA
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.