Evidence map›Paper›PMID 37530080›Full record

ArticleDevelopment (Cambridge, England)2023

kcnj13 regulates pigment cell shapes in zebrafish and has diverged by cis-regulatory evolution between Danio species.

Marco Podobnik, Ajeet P Singh, Zhenqiang Fu, Christopher M Dooley, Hans Georg Frohnhöfer, Magdalena Firlej, Sarah J Stednitz, Hadeer Elhabashy, Simone Weyand, John R Weir and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. The hybrid history of zebrafish.G3 (Bethesda, Md.) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 4 countries.

Marco PodobnikMax Planck Institute for Biology, 72076 Tübingen, Germany.ORCID 0000-0001-5480-7086
Ajeet P SinghChemical Biology and Therapeutics, Novartis Institutes for BioMedical Research, Cambridge, MA 02139, USA.ORCID 0000-0002-3819-5136
Zhenqiang FuSchool of Marine Sciences, Sun Yat-sen University, Zhuhai 519082, China.ORCID 0000-0003-3766-1083
Christopher M DooleyDepartment of Genetics, Max Planck Institute for Heart and Lung Research, 61231 Bad Nauheim, Germany.ORCID 0000-0002-4941-9019
Hans Georg FrohnhöferMax Planck Institute for Biology, 72076 Tübingen, Germany.ORCID 0000-0003-4038-7089
Magdalena FirlejFriedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany.ORCID 0000-0001-6156-9493
Sarah J StednitzDepartment of Anatomy & Physiology, University of Melbourne, Victoria, 3010, Melbourne, Australia.ORCID 0000-0002-8223-1528
Hadeer ElhabashyDepartment of Protein Evolution, Max Planck Institute for Biology, 72076 Tübingen, Germany.ORCID 0000-0002-4677-7064
Simone WeyandDepartment of Biochemistry, University of Cambridge, Cambridge, CB2 1QW, UK.ORCID 0000-0002-7965-0895
John R WeirFriedrich Miescher Laboratory of the Max Planck Society, 72076 Tübingen, Germany.ORCID 0000-0002-6904-0284
Jianguo LuSchool of Marine Sciences, Sun Yat-sen University, Zhuhai 519082, China.ORCID 0000-0002-3966-8812
Christiane Nüsslein-VolhardMax Planck Institute for Biology, 72076 Tübingen, Germany.ORCID 0000-0002-7688-1401
Uwe IrionMax Planck Institute for Biology, 72076 Tübingen, Germany.ORCID 0000-0003-2823-5840
Max Planck Institute for Biology · DEMax Planck Society · DESun Yat-sen University · CNMax Planck Institute for Heart and Lung Research · DEThe University of Melbourne · AUUniversity of Cambridge · GB

Funding

European Research Council 624989
6 · The paper itself

Abstract

Teleost fish of the genus Danio are excellent models to study the genetic and cellular bases of pigment pattern variation in vertebrates. The two sister species Danio rerio and Danio aesculapii show divergent patterns of horizontal stripes and vertical bars that are partly caused by the divergence of the potassium channel gene kcnj13. Here, we show that kcnj13 is required only in melanophores for interactions with xanthophores and iridophores, which cause location-specific pigment cell shapes and thereby influence colour pattern and contrast in D. rerio. Cis-regulatory rather than protein coding changes underlie kcnj13 divergence between the two Danio species. Our results suggest that homotypic and heterotypic interactions between the pigment cells and their shapes diverged between species by quantitative changes in kcnj13 expression during pigment pattern diversification.

Indexed as

PigmentationZebrafishAnimalsCell ShapeMelanophoresPotassium Channels, Inwardly RectifyingSkinKir7.1 channelPotassium Channels, Inwardly RectifyingDanioEvolutionPigment cellPigment patternZebrafish

Identifiers

PMID37530080
PMCPMC10482006
OpenAlexW4385477211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.