Evidence map›Paper›PMID 37529292›Full record

ArticleQRB discovery2022

Homologous basic helix-loop-helix transcription factors induce distinct deformations of torsionally-stressed DNA: a potential transcription regulation mechanism.

Johanna Hörberg, Kevin Moreau, Anna Reymer

Abstract read
In one paragraph

Article in QRB discovery, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Johanna HörbergDepartment of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden.ORCID https://orcid.org/0000-0002-5232-3528
Kevin MoreauDepartment of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden.ORCID https://orcid.org/0000-0002-3686-0737
Anna ReymerDepartment of Chemistry and Molecular Biology, University of Gothenburg, 40530 Gothenburg, Sweden.ORCID https://orcid.org/0000-0001-8458-7918

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changing torsional restraints on DNA is essential for the regulation of transcription. Torsional stress, introduced by RNA polymerase, can propagate along chromatin facilitating topological transitions and modulating the specific binding of transcription factors (TFs) to DNA. Despite the importance, the mechanistic details on how torsional stress impacts the TFs-DNA complexation remain scarce. Herein, we address the impact of torsional stress on DNA complexation with homologous human basic helix-loop-helix (BHLH) hetero- and homodimers: MycMax, MadMax and MaxMax. The three TF dimers exhibit specificity towards the same DNA consensus sequence, the

Indexed as

Basic helix–loop–helix transcription factorsDNA deformationDNA–protein interactionsmolecular dynamics simulationstorsionally-stressed DNA

Identifiers

PMID37529292
PMCPMC10392670

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.