Evidence map›Paper›PMID 37529100›Full record

ArticleiScience2023

Federated generalized linear mixed models for collaborative genome-wide association studies.

Wentao Li, Han Chen, Xiaoqian Jiang, Arif Harmanci

Abstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Wentao LiSchool of Biomedical Informatics, University of Texas Health Science Center, Houston, TX 77030, USA.
Han ChenSchool of Biomedical Informatics, University of Texas Health Science Center, Houston, TX 77030, USA.
Xiaoqian JiangSchool of Biomedical Informatics, University of Texas Health Science Center, Houston, TX 77030, USA.
Arif HarmanciSchool of Biomedical Informatics, University of Texas Health Science Center, Houston, TX 77030, USA.

Funding

Open Health Natural Language Processing CollaboratoryU01TR002062 · NCATS · MAYO CLINIC ROCHESTER · PI JIANG, XIAOQIAN, LIU, HONGFANG · 2017 to 2021
$7.6M
Finding Combinatorial Drug Repositioning Therapy For Alzheimer'S Disease And Related DementiasR01AG066749 · NIA · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI JIANG, XIAOQIAN, ZHENG, WENJIN JIM · 2020 to 2024
$4.4M
Secure Outsourcing of Genotype Imputation for Privacy-aware Genomic Analysis (RO1HE21)R01HG012604 · NHGRI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI Arif Ozgun Harmanci · 2023 to 2026
$2.2M
NCATS NIH HHS U01 TR002062NHGRI NIH HHS R01 HG012604NIA NIH HHS R01 AG066749
6 · The paper itself

Abstract

Federated association testing is a powerful approach to conduct large-scale association studies where sites share intermediate statistics through a central server. There are, however, several standing challenges. Confounding factors like population stratification should be carefully modeled across sites. In addition, it is crucial to consider disease etiology using flexible models to prevent biases. Privacy protections for participants pose another significant challenge. Here, we propose distributed Mixed Effects Genome-wide Association study (

Indexed as

Clinical geneticsGenomicsHealth sciencesHuman genetics

Identifiers

PMID37529100
PMCPMC10387571

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.