Evidence map›Paper›PMID 37528748›Full record

ArticleALTEX2024

Why adverse outcome pathways need to be FAIR.

Clemens Wittwehr, Laure-Alix Clerbaux, Stephen Edwards, Michelle Angrish, Holly Mortensen, Annamaria Carusi, Maciej Gromelski, Eftychia Lekka, Vassilis Virvilis, Marvin Martens and 2 more

Abstract read
In one paragraph

Article in ALTEX, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Clemens WittwehrEuropean Commission, Joint Research Centre (JRC), Ispra, Italy.
Laure-Alix ClerbauxEuropean Commission, Joint Research Centre (JRC), Ispra, Italy.
Stephen EdwardsRTI International, Research Triangle Park, NC, USA.
Michelle AngrishCenter for Public Health and Environmental Assessment, Chemical & Pollutant Assessment Division, U.S. Environmental Protection Agency, Washington DC, USA.
Holly MortensenCenter for Public Health and Environmental Assessment, Public Health and Integrated Toxicology Division, U.S. Environmental Protection Agency, Durham, NC, USA.
Annamaria CarusiInterchange Research, London, UK.
Maciej GromelskiLaboratory of Environmental Chemoinformatics, Faculty of Chemistry, University of Gdańsk, Gdańsk, Poland.
Eftychia LekkaBiovista, Athens, Greece.
Vassilis VirvilisBiovista, Athens, Greece.
Marvin MartensDepartment of Bioinformatics - BiGCaT, NUTRIM, Maastricht University, Maastricht, The Netherlands.
Luiz Olavo Bonino da Silva SantosGO FAIR Foundation, Leiden, the Netherlands.
Penny NymarkKarolinska Institutet, Institute of Environmental Medicine, Stockholm, Sweden.

Funding

Intramural EPA EPA999999
6 · The paper itself

Abstract

Adverse outcome pathways (AOPs) provide evidence for demonstrating and assessing causality between measurable toxicological mechanisms and human or environmental adverse effects. AOPs have gained increasing attention over the past decade and are believed to provide the necessary steppingstone for more effective risk assessment of chemicals and materials and moving beyond the need for animal testing. However, as with all types of data and knowledge today, AOPs need to be reusable by machines, i.e., machine-actionable, in order to reach their full impact potential. Machine-actionability is supported by the FAIR principles, which guide findability, accessibility, interoperability, and reusability of data and knowledge. Here, we describe why AOPs need to be FAIR and touch on aspects such as the improved visibility and the increased trust that FAIRification of AOPs provides.

Indexed as

Adverse Outcome PathwaysAnimalsHumansRisk Assessmentadverse outcome pathways (AOPs)FAIR datamachine-actionabilitytrustvisibility

Identifiers

PMID37528748
PMCPMC11177558

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.