Evidence map›Paper›PMID 37528457›Full record

ArticleMicrobiome2023

A synbiotic mixture of selected oligosaccharides and bifidobacteria assists murine gut microbiota restoration following antibiotic challenge.

Emily C Hoedt, Cara M Hueston, Nora Cash, Roger S Bongers, Jonathan M Keane, Kees van Limpt, Kaouther Ben Amor, Jan Knol, John MacSharry, Douwe van Sinderen

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 3 countries.

Emily C HoedtAPC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.
Cara M HuestonAPC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.
Nora CashAPC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.
Roger S BongersDanone Nutricia Research, Utrecht, The Netherlands.
Jonathan M KeaneAPC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland.
Kees van LimptDanone Nutricia Research, Utrecht, The Netherlands.
Kaouther Ben AmorDanone Nutricia Research, Utrecht, The Netherlands.
Jan KnolDanone Nutricia Research, Utrecht, The Netherlands.
John MacSharry *APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland. j.macsharry@ucc.ie.
Douwe van Sinderen *APC Microbiome Ireland, University College Cork, Western Road, Cork, Ireland. d.vansinderen@ucc.ie.
University College Cork · IENutricia Research (Netherlands) · NLAPC Microbiome Institute · IEDanone (Netherlands) · NLDanone Nutricia Research (Netherlands)National Health and Medical Research Council · AU

Funding

Science Foundation Ireland SFI/12/RC/2273_P2
6 · The paper itself

Abstract

backgroundTypically, animal models studying gastrointestinal microbiotas compromised in early life have employed either germ-free animals or mice treated with a cocktail of antibiotics. Such studies intend to mimic scenarios of infants born by caesarean section and/or subjected to antibiotic treatment. However, the antibiotics used in these studies are rarely prescribed to infants. Therefore, an early life model was developed in which the murine gastrointestinal microbiota was severely disrupted by clindamycin treatment.

resultsIn this mouse model, we investigated the extent supplementation with a synbiotic mixture of prebiotics, being scGOS/lcFOS with the human milk oligosaccharide 2'-Fucosyllactose (2'-FL), in combination with or without single strain or mix of "infant type" bifidobacteria, can rescue an antibiotic-compromised microbiota. Shotgun metagenomic sequencing showed that the microbiota was severely disrupted by the clindamycin challenge. No recovery was observed 3 weeks post-challenge in the scGOS/lcFOS/2'FL group, while the group that received the synbiotic treatment of scGOS/lcFOS/2'-FL with Bifidobacterium breve NRBB01 showed partial recovery. Strikingly in the scGOS/lcFOS/2'-FL group receiving the mixture of bifidobacteria resulted in a recovery of the microbiota disruption. Histological analyses showed that the clindamycin-treated animals at the end of the experiment still suffered from mild oedema and villi/colonic crypt irregularities which was ameliorated by the synbiotic intervention.

conclusionOur study demonstrates that supplementation of synbiotic mixture of scGOS/lcFOS/2'-FL in combination with a specific mix of infant-type bifidobacterial strains is able to partially revive an antibiotic-perturbed gastrointestinal microbiota. Video Abstract.

Indexed as

Gastrointestinal MicrobiomeSynbioticsAnimalsAnti-Bacterial AgentsBifidobacteriumCesarean SectionClindamycinFemaleHumansInfantMiceOligosaccharidesPregnancyAnti-Bacterial AgentsClindamycinOligosaccharides

Identifiers

PMID37528457
PMCPMC10394833
OpenAlexW4385477365

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.