Evidence map›Paper›PMID 37527838›Full record

ArticleJournal of Crohn's & colitis2024

Faecal Bacteriome and Metabolome Profiles Associated with Decreased Mucosal Inflammatory Activity Upon Anti-TNF Therapy in Paediatric Crohn's Disease.

Jakub Hurych, Anna Mascellani Bergo, Tereza Lerchova, Lucie Hlinakova, Michal Kubat, Hana Malcova, Dita Cebecauerova, Jan Schwarz, Eva Karaskova, Tomas Hecht and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of Crohn's & colitis, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 3 pooled it
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 3 syntheses or guidelines pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Saudi consensus guidance for the diagnosis and management of inflammatory bowel disease in children and adolescents.Saudi journal of gastroenterology : official journal of the Saudi Gastroenterology Association · 2025
    Guideline
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 1 country.

Jakub HurychDepartment of Medical Microbiology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.ORCID 0000-0002-9813-5290
Anna Mascellani BergoDepartment of Food Science, Faculty of Agrobiology, Food and Natural Resources, Czech Univesity of Life Sciences, Prague, Czechia.
Tereza LerchovaDepartment of Paediatrics, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.
Lucie HlinakovaDepartment of Paediatrics, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.
Michal KubatDepartment of Paediatrics, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.
Hana MalcovaDepartment of Pediatric and Adult Rheumatology, Motol University Hospital, Prague, Czechia.
Dita CebecauerovaDepartment of Pediatric and Adult Rheumatology, Motol University Hospital, Prague, Czechia.
Jan SchwarzDepartment of Paediatrics, Faculty of Medicine in Pilsen, Charles University and University Hospital Pilsen, Czechia.
Eva KaraskovaDepartment of Paediatrics, Faculty of Medicine, Palacky University Olomouc and University Hospital Olomouc, Czechia.
Tomas HechtDepartment of Paediatrics, 1st Faculty of Medicine, Charles University and Thomayer University Hospital, Prague, Czechia.
Radim VyhnanekDepartment of Paediatrics, 1st Faculty of Medicine, Charles University and Thomayer University Hospital, Prague, Czechia.
Lenka ToukalkovaDepartment of Paediatrics, Tomas Bata Hospital, Zlin, Czechia.
Vojtech DotlacilDepartment of Paediatric Surgery, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.
Katerina GreinerovaDepartment of Paediatrics, Masaryk Hospital, Usti nad Labem, Czechia.
Anabela CizkovaSynlab Czech, Inc., Prague, Czechia.
Rudolf HorvathDepartment of Pediatric and Adult Rheumatology, Motol University Hospital, Prague, Czechia.
Jiri BronskyDepartment of Paediatrics, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.ORCID 0000-0002-2641-7280
Jaroslav HavlikDepartment of Food Science, Faculty of Agrobiology, Food and Natural Resources, Czech Univesity of Life Sciences, Prague, Czechia.
Ondrej HradskyDepartment of Paediatrics, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.ORCID 0000-0001-6193-0488
Ondrej CinekDepartment of Medical Microbiology, 2nd Faculty of Medicine, Charles University and Motol University Hospital, Prague, Czechia.
Charles University · CZUniversity Hospital in Motol · CZCzech University of Life Sciences Prague · CZKrajská nemocnice T. Bati · CZKrajská Zdravotní · CZSynlab Czech (Czechia) · CZUniversity Hospital Olomouc · CZ

Funding

conceptual development of research organization 00064203European Union-Next GenerationGrant Agency of Charles University 166119Ministry of Health, the Czech RepublicNational Institute of Virology and Bacteriology LX22NPO5103
6 · The paper itself

Abstract

BACKGROUND AND

aimsTreatment with anti-tumour necrosis factor α antibodies [anti-TNF] changes the dysbiotic faecal bacteriome in Crohn's disease [CD]. However, it is not known whether these changes are due to decreasing mucosal inflammatory activity or whether similar bacteriome reactions might be observed in gut-healthy subjects. Therefore, we explored changes in the faecal bacteriome and metabolome upon anti-TNF administration [and therapeutic response] in children with CD and contrasted those to anti-TNF-treated children with juvenile idiopathic arthritis [JIA].

methodsFaecal samples collected longitudinally before and during anti-TNF therapy were analysed with regard to the bacteriome by massively parallel sequencing of the 16S rDNA [V4 region] and the faecal metabolome by 1H nuclear magnetic resonance imaging. The response to treatment by mucosal healing was assessed by the MINI index at 3 months after the treatment started. We also tested several representative gut bacterial strains for in vitro growth inhibition by infliximab.

resultsWe analysed 530 stool samples from 121 children [CD 54, JIA 18, healthy 49]. Bacterial community composition changed on anti-TNF in CD: three members of the class Clostridia increased on anti-TNF, whereas the class Bacteroidia decreased. Among faecal metabolites, glucose and glycerol increased, whereas isoleucine and uracil decreased. Some of these changes differed by treatment response [mucosal healing] after anti-TNF. No significant changes in the bacteriome or metabolome were noted upon anti-TNF in JIA. Bacterial growth was not affected by infliximab in a disc diffusion test.

conclusionsOur findings suggest that gut mucosal healing is responsible for the bacteriome and metabolome changes observed in CD, rather than any general effect of anti-TNF.

Indexed as

Crohn DiseaseBacteriaChildHumansInfliximabMetabolomeTumor Necrosis Factor InhibitorsInfliximabTumor Necrosis Factor Inhibitorsanti-TNFchildrenCrohn’s diseaseIBDmetabolomicsmicrobiome

Identifiers

PMID37527838
PMCPMC10821711
OpenAlexW4385443413

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.