Evidence map›Paper›PMID 37526750›Full record

ArticleJournal of plant research2023

Heterologous gene expression system for the production of hydrolyzable tannin intermediates in herbaceous model plants.

Chihiro Oda-Yamamizo, Nobutaka Mitsuda, Carsten Milkowski, Hideyuki Ito, Kentaro Ezura, Ko Tahara

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in Journal of plant research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Chihiro Oda-YamamizoDepartment of Forest Molecular Genetics and Biotechnology, Forestry and Forest Products Research Institute (FFPRI), 1 Matsunosato, Tsukuba, Ibaraki, 305-8687, Japan.ORCID http://orcid.org/0009-0004-1490-6177
Nobutaka MitsudaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8566, Japan.ORCID http://orcid.org/0000-0001-5689-3678
Carsten MilkowskiAGRIPOLY: International Graduate School in Agricultural and Polymer Sciences, Martin Luther University Halle-Wittenberg, Betty-Heimann-Straße 3, 06120, Halle, Germany.ORCID http://orcid.org/0000-0001-9758-6789
Hideyuki ItoFaculty of Health and Welfare Science, Okayama Prefectural University, 111 Kuboki, Soja, Okayama, 719-1197, Japan.ORCID http://orcid.org/0000-0002-5756-2069
Kentaro EzuraBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, 305-8566, Japan.ORCID http://orcid.org/0000-0002-2303-3396
Ko TaharaDepartment of Forest Molecular Genetics and Biotechnology, Forestry and Forest Products Research Institute (FFPRI), 1 Matsunosato, Tsukuba, Ibaraki, 305-8687, Japan. taharako@affrc.go.jp.ORCID http://orcid.org/0000-0002-9219-7191
Forestry and Forest Products Research Institute · JPJapan Society for the Promotion of Science · JPMartin Luther University Halle-Wittenberg · DENational Institute of Advanced Industrial Science and Technology · JPOkayama Prefectural University · JP

Funding

Japan Society for the Promotion of Science JP18H02246Japan Society for the Promotion of Science JP22H02391Japan Society for the Promotion of Science JP22K05739
6 · The paper itself

Abstract

Aluminum toxicity is the main factor limiting the elongation of plant roots in acidic soil. The tree species Eucalyptus camaldulensis is considerably more resistant to aluminum than herbaceous model plants and crops. Hydrolyzable tannins (HTs) accumulating in E. camaldulensis roots can bind and detoxify the aluminum taken up by the roots. However, in herbaceous model plants, HTs do not accumulate and the genes involved in the HT biosynthetic pathway are largely unknown. The aim of this study was to establish a method for reconstituting the HT biosynthetic pathway in the HT non-accumulating model plant Nicotiana benthamiana. Four E. camaldulensis enzymes were transiently expressed in N. benthamiana leaves via Agrobacterium tumefaciens-mediated transformation. These enzymes included dehydroquinate dehydratase/shikimate dehydrogenases (EcDQD/SDH2 and EcDQD/SDH3), which catalyze the synthesis of gallic acid, the first intermediate of the HT biosynthetic pathway that branches off from the shikimate pathway. The others were UDP-glycosyltransferases (UGT84A25 and UGT84A26), which catalyze the conversion of gallic acid to β-glucogallin, the second intermediate. The co-expression of the EcDQD/SDHs in transgenic N. benthamiana leaf regions promoted the synthesis of gallic acid. Moreover, the co-expression of the UGT84As in addition to the EcDQD/SDHs resulted in the biosynthesis of β-glucogallin, the universal metabolic precursor of HTs. Thus, we successfully reconstituted a portion of the HT biosynthetic pathway in HT non-accumulating N. benthamiana plants. This heterologous gene expression system will be useful for co-expressing candidate genes involved in downstream reactions in the HT biosynthetic pathway and for clarifying their in planta functions.

Indexed as

AluminumHydrolyzable TanninsGallic AcidGene ExpressionShikimic AcidTreesAluminumGallic AcidglucogallinHydrolyzable TanninsshikimateShikimic AcidBiosynthetic pathwayEucalyptus camaldulensisHerbaceous model plantsHeterologous expressionHydrolyzable tannin

Identifiers

PMID37526750
PMCPMC10587339
OpenAlexW4385442849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.