Evidence map›Paper›PMID 37526140›Full record

ReviewBiochemical Society transactions2023

Unlocking the secrets of ABEs: the molecular mechanism behind their specificity.

Xiaoyu Chen, Mitchell J McAndrew, Audrone Lapinaite

Open access · hybridAbstract readReview
In one paragraph

Review in Biochemical Society transactions, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Xiaoyu Chen *School of Molecular Sciences, Arizona State University, Tempe, AZ, U.S.A.
Mitchell J McAndrew *School of Molecular Sciences, Arizona State University, Tempe, AZ, U.S.A.
Audrone LapinaiteSchool of Molecular Sciences, Arizona State University, Tempe, AZ, U.S.A.ORCID 0000-0002-9427-9342
Arizona State University · US

Funding

Engineering Novel Precision Genome Editing ToolsDP2GM149550 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI LAPINAITE, AUDRONE · 2022 to 2025
$2.3M
NIGMS NIH HHS DP2 GM149550
6 · The paper itself

Abstract

CRISPR-Cas, the bacterial immune systems, have transformed the field of genome editing by providing efficient, easily programmable, and accessible tools for targeted genome editing. DNA base editors (BE) are state-of-the-art CRISPR-based technology, allowing for targeted modifications of individual nucleobases within the genome. Among the BEs, adenine base editors (ABEs) have shown great potential due to their ability to convert A-to-G with high efficiency. However, current ABEs have limitations in terms of their specificity and targeting range. In this review, we provide an overview of the molecular mechanism of ABEs, with a focus on the mechanism of deoxyadenosine deamination by evolved tRNA-specific adenosine deaminase (TadA). We discuss how mutations and adjustments introduced via both directed evolution as well as rational design have improved ABE efficiency and specificity. This review offers insights into the molecular mechanism of ABEs, providing a roadmap for future developments in the precision genome editing field.

Indexed as

AdenineCRISPR-Cas SystemsGene EditingGenomeMutationAdeninedeaminationDNA adenine base editorDNA base editingDNA deaminasegenome editingtRNA deaminase

Identifiers

PMID37526140
PMCPMC10586758
OpenAlexW4385441706

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.