ArticleCommunications biology2023
Chromosome-level genome assembly and population genomics of Robinia pseudoacacia reveal the genetic basis for its wide cultivation.
Article in Communications biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.
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12 citing papers in PubMed.
- Chromosome-scale genome of Ormosia hosiei provides insights into legume tree genome evolution.BMC genomics · 2026Article
- Characterization of the sexual reproductive process in the perennial treeForestry research · 2026Article
- Development of KASP markers, SNP fingerprinting and population structure analysis ofFrontiers in plant science · 2026Article
- LGRPv2: A high-value platform for the advancement of Fabaceae genomics.Plant biotechnology journal · 2025Article
- Genetic structure analysis and core germplasm construction of Robinia pseudoacacia and its closely related species based on SNP.BMC plant biology · 2025Article
- A complex interplay of genetic introgression and local adaptation during the evolutionary history of three closely related spruce species.Plant diversity · 2025Article
- Cryptic divergence in and evolutionary dynamics of endangered hybrid Picea brachytyla sensu stricto in the Qinghai-Tibet Plateau.BMC plant biology · 2024Article
- Temporal genomics in Hawaiian crickets reveals compensatory intragenomic coadaptation during adaptive evolution.Nature communications · 2024Article
- Chromosome-level genome assembly and characterization of the Calophaca sinica genome.DNA research : an international journal for rapid publication of reports on genes and genomes · 2024Article
- Article
- Genomic and Transcriptomic Insights into the Genetic Basis of Foam Secretion in Rice SpittlebugInternational journal of molecular sciences · 2024Article
- Genome Assembly ofInternational journal of molecular sciences · 2023Article
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7 authors.
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Abstract
Urban greening provides important ecosystem services and ideal places for urban recreation and is a serious consideration for municipal decision-makers. Among the tree species cultivated in urban green spaces, Robinia pseudoacacia stands out due to its attractive flowers, fragrances, high trunks, wide adaptability, and essential ecosystem services. However, the genomic basis and consequences of its wide-planting in urban green spaces remains unknown. Here, we report the chromosome-level genome assembly of R. pseudoacacia, revealing a genome size of 682.4 Mb and 33,187 protein-coding genes. More than 99.3% of the assembly is anchored to 11 chromosomes with an N50 of 59.9 Mb. Comparative genomic analyses among 17 species reveal that gene families related to traits favoured by urbanites, such as wood formation, biosynthesis, and drought tolerance, are notably expanded in R. pseudoacacia. Our population genomic analyses further recover 11 genes that are under recent selection. Ultimately, these genes play important roles in the biological processes related to flower development, water retention, and immunization. Altogether, our results reveal the evolutionary forces that shape R. pseudoacacia cultivated for urban greening. These findings also present a valuable foundation for the future development of agronomic traits and molecular breeding strategies for R. pseudoacacia.
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