Evidence map›Paper›PMID 37523538›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Engineered calprotectin-sensing probiotics for IBD surveillance in humans.

Jonathan Y Xia, Chelsea Hepler, Peter Tran, Nathan J Waldeck, Joseph Bass, Arthur Prindle

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
8.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  10. Microbial Biosensor for Sensing and Treatment of Intestinal Inflammation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  11. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jonathan Y XiaDivision of Gastroenterology and Hepatology, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611.ORCID 0000-0003-1225-2566
Chelsea HeplerDivision of Endocrinology, Metabolism and Molecular Medicine, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611.ORCID 0000-0001-9938-382X
Peter TranDepartment of Chemical and Biological Engineering, Northwestern University, Evanston, IL 60208.ORCID 0000-0002-2232-5979
Nathan J WaldeckDivision of Endocrinology, Metabolism and Molecular Medicine, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611.
Joseph BassDivision of Endocrinology, Metabolism and Molecular Medicine, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611.ORCID 0000-0002-1602-8601
Arthur PrindleDepartment of Biochemistry and Molecular Genetics, Feinberg School of Medicine, Northwestern University, Chicago, IL 60611.
Northwestern University · US

Funding

Tumor Environment and Metastasis (TEAM) Research ProgramP30CA060553 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LEONIDAS C. PLATANIAS · 1993 to 2026
$153.9M
Virology and Immunology Technology CoreP30AI117943 · NIAID · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Mohamed Abdel Mohsen · 2015 to 2026
$38.4M
SLOW WAVE SLEEP AND TYPE 2 DIABETES RISK IN AGINGP01AG011412 · NIA · UNIVERSITY OF CHICAGO · PI TUREK, FRED W · 1994 to 2021
$31.5M
Pilot and Feasibility ProgramP30DK020595 · NIDDK · UNIVERSITY OF CHICAGO · PI Raghavendra G Mirmira · 2013 to 2026
$20.9M
Integration of Feeding Time and Glucose Metabolism by the Circadian Gene NetworkR01DK090625 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BASS, JOSEPH, LERNER, TALIA NEWCOMBE · 2011 to 2025
$6.9M
Cross-regulation of Immunometabolism and Circadian Pathways in Obesity PathophysiologyR01DK127800 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BASS, JOSEPH · 2021 to 2025
$2.3M
Circadian SCN-Liver Axis in the Neuroendocrine Response to Calorie RestrictionR01DK132647 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Joseph Bass · 2023 to 2026
$2.1M
Emergent metabolic coordination and cell-to-cell signaling in bacterial biofilms-ADMIN SUPP for EquipmentR35GM147170 · NIGMS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI Arthur Prindle · 2022 to 2026
$2.1M
Bioenergetic Mechanisms Underlying Circadian Dietary InterventionR01AG065988 · NIA · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BASS, JOSEPH · 2019 to 2023
$2.0M
The Circadian System as a Neuronal Regulator of Feeding Time and Body Weight SetpointR01DK113011 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI BASS, JOSEPH · 2018 to 2021
$1.7M
A Central Circadian Clock-Adipose Tissue Circuit Regulates Thermogenesis and Energy BalanceF32DK122675 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI HEPLER, CHELSEA · 2020 to 2023
$204k
Circadian Mechanisms of Hedonic Feeding in ObesityF31DK130589 · NIDDK · NORTHWESTERN UNIVERSITY AT CHICAGO · PI WALDECK, NATHAN JAMES · 2021 to 2023
$126k
NCI NIH HHS P30 CA060553NIAID NIH HHS P30 AI117943NIA NIH HHS P01 AG011412NIA NIH HHS R01 AG065988NIDDK NIH HHS F31 DK130589NIDDK NIH HHS F32 DK122675NIDDK NIH HHS P30 DK020595NIDDK NIH HHS R01 DK090625NIDDK NIH HHS R01 DK113011NIDDK NIH HHS R01 DK127800NIDDK NIH HHS R01 DK132647NIGMS NIH HHS R35 GM147170
6 · The paper itself

Abstract

Inflammatory bowel disease (IBD) is a spectrum of autoimmune diseases affecting the gastrointestinal tract characterized by a relapsing and remitting course of gut mucosal inflammation. Disease flares can be difficult to predict, and the current practice of IBD disease activity surveillance through endoscopy is invasive and requires medical expertise. Recent advancements in synthetic biology raise the possibility that symbiotic microbes can be engineered to selectively detect disease biomarkers used in current clinical practice. Here, we introduce an engineered probiotic capable of detecting the clinical gold standard IBD biomarker, calprotectin, with sensitivity and specificity in IBD patients. Specifically, we identified a bacterial promoter in the probiotic strain

Indexed as

ColitisInflammatory Bowel DiseasesProbioticsAnimalsBiomarkersFecesHumansLeukocyte L1 Antigen ComplexMicePilot ProjectsSensitivity and SpecificityBiomarkersLeukocyte L1 Antigen Complexinflammatory bowel diseasemicrobiomeprobioticssynthetic biology

Identifiers

PMID37523538
PMCPMC10410751
OpenAlexW4385410034

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.