Evidence map›Paper›PMID 37521833›Full record

ArticleThe Egyptian journal of medical human genetics2022

The role of tumor necrosis factor alpha - 308A > G polymorphism on the clinical states of SARS-CoV-2 infection.

Francisco Sotomayor-Lugo, Claudia Alemañy-Díaz Perera, Hilda Roblejo-Balbuena, Yaíma Zúñiga-Rosales, Giselle Monzón-Benítez, Beatriz Suárez-Besil, María de Los Ángeles González-Torres, Bárbara Torres-Rives, Yudelmis Álvarez-Gavilán, Maidalys Bravo-Ramírez and 4 more

Open access · diamondAbstract read
In one paragraph

Article in The Egyptian journal of medical human genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Francisco Sotomayor-LugoNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0001-9854-8688
Claudia Alemañy-Díaz PereraMedical University of Havana, Havana, Cuba.ORCID https://orcid.org/0000-0002-3438-9195
Hilda Roblejo-BalbuenaNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0002-5895-8057
Yaíma Zúñiga-RosalesNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0001-9483-9971
Giselle Monzón-BenítezNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0001-9324-0772
Beatriz Suárez-BesilNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0002-6305-9179
María de Los Ángeles González-TorresNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0002-7793-507X
Bárbara Torres-RivesNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0001-9729-5172
Yudelmis Álvarez-GavilánNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0003-4990-9023
Maidalys Bravo-RamírezNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0003-3170-7132
Nayade Pereira-RocheNational Center of Medical Genetics, Havana, Cuba.ORCID 0000-0002-3801-5609
Yudelkis Benítez-CorderoNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0002-9688-7501
Luis Carlos Silva-AyçaguerNational School of Public Health, Havana, Cuba.ORCID https://orcid.org/0000-0002-0734-0054
Beatriz Marcheco-TeruelNational Center of Medical Genetics, Havana, Cuba.ORCID https://orcid.org/0000-0001-6009-0405
Cuban Neuroscience Center · CUUniversity of Havana · CU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Tumor necrosis factor-alpha (TNFɑ) is a cytokine that manages the host defense mechanism, which may play a role in the pathogenesis of COVID-19 patients. Several single-nucleotide polymorphisms, described in the promoter region of the TNFα gene, have a significant role on its transcriptional activity. These include the - 308A > G polymorphism which increases the TNFα levels with the expression of the A allele. The aim of this study was to explore whether the TNFα.- 308A > G polymorphism affects the clinical state of COVID-19 patients. The study included a total of 1028 individuals infected with severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), which were distributed in 3 groups: asymptomatic, mild symptomatic and severe symptomatic patients. The amplification-refractory mutation system was used to determine the genotype of the TNFα.- 308A > G polymorphism. Results: Results show a higher tendency of being asymptomatic in individuals carrying the GG genotype (336 of 411; OR 1.24, 95% CI 0.91-1.70). The development of a severe form of SARS-CoV-2 infection was not found in subjects with the A allele compared to those with the G allele (OR 0.96, 95% CI 0.51-1.79), except in the eastern region of the country where the risk increased (OR 4.41, 95% CI 1.14-17.05). However, the subjects carrying the A allele had a higher chance of developing symptoms (OR 1.24, 95% CI 0.91-1.70) compared to those with the G allele. Conclusion: The TNFα.- 308A allele has an influence on developing symptoms of COVID-19 in Cuban patients, and that it particularly increases the risk of presenting severe forms of the disease in the eastern region of the country.

Indexed as

Coronavirus infectionsCOVID-19SARS-CoV-2Severe acute respiratory syndrome coronavirus 2Tumor necrosis factor alpha

Identifiers

PMID37521833
PMCPMC8900469
OpenAlexW4221133685

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.