Evidence map›Paper›PMID 37520355›Full record

ArticleFrontiers in microbiology2023

Insights into the physiological and genomic characterization of three bacterial isolates from a highly alkaline, terrestrial serpentinizing system.

Jaclyn Thompson, Casey Barr, Lydia Babcock-Adams, Lina Bird, Eugenio La Cava, Arkadiy Garber, Yuichi Hongoh, Mark Liu, Kenneth H Nealson, Akihiro Okamoto and 5 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 2 countries.

Jaclyn ThompsonDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Casey BarrDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Lydia Babcock-AdamsDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, United States.
Lina BirdCenter for Bio/Molecular Science and Engineering, Naval Research Laboratory, Washington, DC, United States.
Eugenio La CavaNational Institute for Materials Science, Tsukuba, Ibaraki, Japan.
Arkadiy GarberDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Yuichi HongohSchool of Life Science and Technology, Tokyo Institute of Technology, Tokyo, Japan.
Mark LiuDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Kenneth H NealsonDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Akihiro OkamotoResearch Center for Macromolecules and Biomaterials, National Institute for Materials Science, Tsukuba, Japan.
Daniel RepetaDepartment of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution, Woods Hole, MA, United States.
Shino SuzukiInstitute of Space and Astronautical Science (ISAS), Japan Aerospace Exploration Agency (JAXA), Sagamihara, Sagamihara, Kanagawa, Japan.
Clarissa TactoDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Michelle TashjianDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
Nancy MerinoDepartment of Earth Sciences, University of Southern California, Los Angeles, CA, United States.
University of Southern California · USWoods Hole Oceanographic Institution · USJapan Aerospace Exploration Agency · JPNational Institute for Materials Science · JPTokyo Institute of Technology · JPUnited States Naval Research Laboratory · USUniversity of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The terrestrial serpentinite-hosted ecosystem known as "The Cedars" is home to a diverse microbial community persisting under highly alkaline (pH ~ 12) and reducing (Eh < -550 mV) conditions. This extreme environment presents particular difficulties for microbial life, and efforts to isolate microorganisms from The Cedars over the past decade have remained challenging. Herein, we report the initial physiological assessment and/or full genomic characterization of three isolates:

Indexed as

alkaliphilealkali-tolerantextracellular electron transferfacultative anaerobegenomeserpentinizationsiderophore

Identifiers

PMID37520355
PMCPMC10373932
OpenAlexW4384154867

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.