Evidence map›Paper›PMID 37515262›Full record

ArticleViruses2023

Inferring Evolutionary Timescale of Omsk Hemorrhagic Fever Virus.

Artem N Bondaryuk, Olga I Belykh, Evgeny I Andaev, Yurij S Bukin

Abstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Artem N BondaryukLaboratory of Natural Focal Viral Infections, Irkutsk Antiplague Research Institute of Siberia and the Far East, Irkutsk 664047, Russia.ORCID 0000-0003-4422-0497
Olga I BelykhLimnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk 664033, Russia.ORCID 0000-0002-1188-7351
Evgeny I AndaevLaboratory of Natural Focal Viral Infections, Irkutsk Antiplague Research Institute of Siberia and the Far East, Irkutsk 664047, Russia.
Yurij S BukinLimnological Institute, Siberian Branch of the Russian Academy of Sciences, Irkutsk 664033, Russia.ORCID 0000-0002-4534-3846

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Until 2020, there were only three original complete genome (CG) nucleotide sequences of Omsk hemorrhagic fever virus (OHFV) in GenBank. For this reason, the evolutionary rate and divergence time assessments reported in the literature were based on the E gene sequences, but notably without temporal signal evaluation, such that their reliability is unclear. As of July 2022, 47 OHFV CG sequences have been published, which enables testing of temporal signal in the data and inferring unbiased and reliable substitution rate and divergence time values. Regression analysis in the TempEst software demonstrated a stronger clocklike behavior in OHFV samples for the complete open reading frame (ORF) data set (R

Indexed as

Encephalitis Viruses, Tick-BorneBayes TheoremPhylogenyReproducibility of Resultsevolutionary ratephylogeneticspopulation dynamicssubstitution ratetemporal signal

Identifiers

PMID37515262
PMCPMC10385366

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.