Evidence map›Paper›PMID 37513188›Full record

ArticleMolecules (Basel, Switzerland)2023

LSD1-Based Reversible Inhibitors Virtual Screening and Binding Mechanism Computational Study.

Zhili Yin, Shaohui Liu, Xiaoyue Yang, Mengguo Chen, Jiangfeng Du, Hongmin Liu, Longhua Yang

Abstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Role of Computer-Aided Drug Design in Drug Development.Molecules (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhili YinSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Shaohui LiuSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Xiaoyue YangSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Mengguo ChenSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Jiangfeng DuSchool of Life Sciences, Zhengzhou University, Zhengzhou 450001, China.
Hongmin LiuSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.
Longhua YangSchool of Pharmaceutical Sciences, Zhengzhou University, Zhengzhou 450001, China.ORCID 0000-0002-3583-8255

Funding

Key Scientific and Technological Projects of Henan Province No.232102311174National Natural Science Foundation of China No. 21803058National Natural Science Foundation of China No.82020108030Postdoctoral Research Grant in Henan province No.1902002
6 · The paper itself

Abstract

As one of the crucial targets of epigenetics, histone lysine-specific demethylase 1 (LSD1) is significant in the occurrence and development of various tumors. Although several irreversible covalent LSD1 inhibitors have entered clinical trials, the large size and polarity of the FAD-binding pocket and undesired toxicity have focused interest on developing reversible LSD1 inhibitors. In this study, targeting the substrate-binding pocket of LSD1, structure-based and ligand-based virtual screenings were adopted to expand the potential novel structures with molecular docking and pharmacophore model strategies, respectively. Through drug-likeness evaluation, ADMET screening, molecular dynamics simulations, and binding free energy screening, we screened out one and four hit compounds from the databases of 2,029,554 compounds, respectively. Generally, these hit compounds can be divided into two categories, amide (

Indexed as

Enzyme InhibitorsHistonesHistone DemethylasesMolecular Docking SimulationMolecular Dynamics SimulationStructure-Activity RelationshipEnzyme InhibitorsHistone DemethylasesHistonesbinding free energy calculationsLSD1 inhibitormolecular dockingmolecular dynamics simulationspharmacophore modelvirtual screening

Identifiers

PMID37513188
PMCPMC10383809

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.