Evidence map›Paper›PMID 37511678›Full record

ArticleJournal of personalized medicine2023

Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms.

Wei Xu, Ines Mesa-Eguiagaray, Theresa Kirkpatrick, Jennifer Devlin, Stephanie Brogan, Patricia Turner, Chloe Macdonald, Michelle Thornton, Xiaomeng Zhang, Yazhou He and 6 more

Open access · goldAbstract read
In one paragraph

Article in Journal of personalized medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Wei XuCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
Ines Mesa-EguiagarayCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
Theresa KirkpatrickCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
Jennifer DevlinColon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Medical Research Council, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.
Stephanie BroganClinical Research Team, Oncology Department, Forth Valley Royal Hospital, Stirling Road, Larbert FK5 4WR, UK.
Patricia TurnerClinical Research Team, Oncology Department, Forth Valley Royal Hospital, Stirling Road, Larbert FK5 4WR, UK.
Chloe MacdonaldUniversity Hospital Wishaw & University Hospital Monklands, NHS Lanarkshire, Airdrie ML6 0JS, UK.
Michelle ThorntonWishaw General Hospital, Wishaw ML2 0DP, UK.
Xiaomeng ZhangCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
Yazhou HeCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.ORCID 0000-0003-2358-0143
Xue LiCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
Maria TimofeevaColon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Medical Research Council, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.
Susan FarringtonColon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Medical Research Council, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.ORCID 0000-0001-5955-7389
Farhat DinColon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Medical Research Council, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.
Malcolm DunlopColon Cancer Genetics Group, Medical Research Council Human Genetics Unit, Medical Research Council, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK.
Evropi TheodoratouCentre for Global Health, Usher Institute, University of Edinburgh, Edinburgh EH8 9AG, UK.
University of Edinburgh · GBEdinburgh Cancer Research · GBForth Valley Royal Hospital · GBNHS Lanarkshire · GBUniversity of Southern Denmark · DKWishaw General Hospital · GB

Funding

Cancer Research UK 18927Cancer Research UK 22804Medical Research Council MC_PC_U127527198Medical Research Council MC_U127527198Medical Research Council MC_UU_00007/1
6 · The paper itself

Abstract

We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validation [CRC Cases: n = 1686/Controls: n = 963]. Candidate predictors included age, sex, BMI, wGRS, family history, and symptoms (changes in bowel habits, rectal bleeding, weight loss, anaemia, abdominal pain). The baseline model included all the non-genetic predictors. Models A (baseline model + wGRS) and B (baseline model) were developed based on LASSO regression to select predictors. Models C (baseline model + wGRS) and D (baseline model) were built using all variables. Models' calibration and discrimination were evaluated through the Hosmer-Lemeshow test (calibration curves were plotted) and C-statistics (corrected based on 1000 bootstrapping). The models' prediction performance was: model A (corrected C-statistic = 0.765); model B (corrected C-statistic = 0.753); model C (corrected C-statistic = 0.764); and model D (corrected C-statistic = 0.752). Models A and C, that integrated wGRS with demographic and clinical predictors, had a statistically significant improved prediction performance. Our findings suggest that future application of genetic predictors holds significant promise, which could enhance CRC risk prediction. Therefore, further investigation through model external validation and clinical impact is merited.

Indexed as

colorectal cancerpolygenic risk scoreprediction modelsymptoms

Identifiers

PMID37511678
PMCPMC10381199
OpenAlexW4382725423

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.