Evidence map›Paper›PMID 37509213›Full record

ArticleCancers2023

Assessment of Colorectal Cancer Risk Factors through the Application of Network-Based Approaches in a Racially Diverse Cohort of Colon Organoid Stem Cells.

Matthew Devall, Stephen Eaton, Cynthia Yoshida, Steven M Powell, Graham Casey, Li Li

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Matthew DevallDepartment of Family Medicine, University of Virginia, Charlottesville, VA 22903, USA.ORCID 0000-0001-5943-4397
Stephen EatonDepartment of Family Medicine, University of Virginia, Charlottesville, VA 22903, USA.ORCID 0000-0002-9959-7518
Cynthia YoshidaDigestive Health Center, University of Virginia, Charlottesville, VA 22903, USA.
Steven M PowellDigestive Health Center, University of Virginia, Charlottesville, VA 22903, USA.
Graham CaseyCenter for Public Health Genomics, University of Virginia, Charlottesville, VA 22908, USA.
Li LiDepartment of Family Medicine, University of Virginia, Charlottesville, VA 22903, USA.ORCID 0000-0003-1802-9517
University of Virginia · USUniversity of Virginia Cancer Center

Funding

Women's Oncology Program - WONP30CA044579 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI Dina Gould Halme · 1987 to 2026
$72.1M
Inherited colorectal cancer risk variants: from association to biologyR01CA143237 · NCI · UNIVERSITY OF VIRGINIA · PI CASEY, GRAHAM · 2010 to 2020
$8.4M
Role of MYC-MIZ1 signaling and the inflammatory immune microenvironment in Triple-Negative Breast Cancer Racial DisparitiesP20CA233216 · NCI · CASE WESTERN RESERVE UNIVERSITY · PI VARADAN, VINAY · 2018 to 2021
$3.6M
Biology of Colorectal Cancer Risk EnhancersR01CA204279 · NCI · UNIVERSITY OF VIRGINIA · PI CASEY, GRAHAM, SCACHERI, PETER CHRISTOPHER · 2016 to 2020
$3.0M
NCI NIH HHS P20 CA233216NCI NIH HHS P30 CA044579NCI NIH HHS R01 CA143237NCI NIH HHS R01 CA204279NIH HHS NIH/NCI R01 CA143237NIH HHS NIH/NCI R01 CA204279
6 · The paper itself

Abstract

Numerous demographic factors have been associated with colorectal cancer (CRC) risk. To better define biological mechanisms underlying these associations, we performed RNA sequencing of stem-cell-enriched organoids derived from the healthy colons of seven European Americans and eight African Americans. A weighted gene co-expression network analysis was performed following RNA sequencing. Module-trait relationships were determined through the association testing of each module and five CRC risk factors (age, body mass index, sex, smoking history, and race). Only modules that displayed a significantly positive correlation for gene significance and module membership were considered for further investigation. In total, 16 modules were associated with known CRC risk factors (

Indexed as

agingbody mass indexcolon organoidcolorectal cancer risknetwork analysisracial disparitiessmokingstem cellWGCNA

Identifiers

PMID37509213
PMCPMC10377524
OpenAlexW4383722575

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.