Evidence map›Paper›PMID 37509165›Full record

ArticleBiomolecules2023

Polypeptide Substrate Accessibility Hypothesis: Gain-of-Function R206H Mutation Allosterically Affects Activin Receptor-like Protein Kinase Activity.

Jay C Groppe, Guorong Lu, Mary R Tandang-Silvas, Anupama Pathi, Shruti Konda, Jingfeng Wu, Viet Q Le, Andria L Culbert, Eileen M Shore, Kristi A Wharton and 1 more

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jay C GroppeDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.ORCID 0000-0003-1058-2772
Guorong LuDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.
Mary R Tandang-SilvasDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.
Anupama PathiDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.
Shruti KondaDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.
Jingfeng WuDepartment of Biomedical Sciences, Texas A&M University College of Dentistry, 3302 Gaston Ave, Dallas, TX 75246, USA.
Viet Q LeDepartment of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI 02912, USA.
Andria L CulbertDepartment of Orthopaedics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Eileen M ShoreDepartment of Orthopaedics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.ORCID 0000-0003-2609-6971
Kristi A WhartonDepartment of Molecular Biology, Cell Biology and Biochemistry, Brown University, Providence, RI 02912, USA.ORCID 0000-0001-9625-4336
Frederick S KaplanDepartment of Orthopaedics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104, USA.
Gaston College · USUniversity of Pennsylvania · USBoston Children's Hospital · USBrown University · US

Funding

TRAINING IN MOLECULAR &CELL BIOLOGY &BIOCHEMISTRYT32GM007601 · NIGMS · BROWN UNIVERSITY · PI MOWRY, KIMBERLY L. · 1985 to 2019
$6.4M
Differential regulation of BMP Signals in VivoR01GM068118 · NIGMS · BROWN UNIVERSITY · PI WHARTON, KRISTI A · 2005 to 2014
$2.5M
Mechanisms of BMP Receptor Kinase Dysregulation in Skeletal DysplasiasR03AR056838 · NIAMS · TEXAS A&M UNIVERSITY HEALTH SCIENCE CTR · PI GROPPE, JAY CLEMENS · 2009 to 2011
$215k
NIAMS NIH HHS R03 AR056838NIGMS NIH HHS R01 GM068118NIGMS NIH HHS T32 GM007601
6 · The paper itself

Abstract

Although structurally similar to type II counterparts, type I or activin receptor-like kinases (ALKs) are set apart by a metastable helix-loop-helix (HLH) element preceding the protein kinase domain that, according to a longstanding paradigm, serves passive albeit critical roles as an inhibitor-to-substrate-binding switch. A single recurrent mutation in the codon of the penultimate residue, directly adjacent the position of a constitutively activating substitution, causes milder activation of ACVR1/ALK2 leading to sporadic heterotopic bone deposition in patients presenting with fibrodysplasia ossificans progressiva, or FOP. To determine the protein structural-functional basis for the gain of function, R206H mutant, Q207D (aspartate-substituted caALK2) and HLH subdomain-truncated (208 Ntrunc) forms were compared to one another and the wild-type enzyme through in vitro kinase and protein-protein interaction analyses that were complemented by signaling read-out (p-Smad) in primary mouse embryonic fibroblasts and

Indexed as

Activin Receptors, Type IGain of Function MutationActivin ReceptorsAnimalsFibroblastsMiceMutationPeptidesActivin ReceptorsActivin Receptors, Type IPeptidesACVR1ALK2allosteric regulationBMPRIIbone morphogenetic protein (BMP)FKBP12serine/threonine kinaseSmad MH2

Identifiers

PMID37509165
PMCPMC10376983
OpenAlexW4384338190

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.