Evidence map›Paper›PMID 37507078›Full record

ArticleNeuroImage2023

Improving measurement of blood-brain barrier permeability with reduced scan time using deep-learning-derived capillary input function.

Jonghyun Bae, Chenyang Li, Arjun Masurkar, Yulin Ge, Sungheon Gene Kim

Open access · goldAbstract read
In one paragraph

Article in NeuroImage, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Feasibility of measuring blood-brain barrier permeability using ultra-short echo time radial magnetic resonance imaging.Journal of neuroimaging : official journal of the American Society of Neuroimaging
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jonghyun BaeVilcek Institute of Graduate Biomedical Science, New York University School of Medicine; Center for Biomedical Imaging, Radiology, New York University School of Medicine; Center for Advanced Imaging Innovation and Research, Radiology, New York University School of Medicine; Department of Radiology, Weill Cornell Medical College. Electronic address: job4015@med.cornell.edu.
Chenyang LiVilcek Institute of Graduate Biomedical Science, New York University School of Medicine; Center for Biomedical Imaging, Radiology, New York University School of Medicine; Center for Advanced Imaging Innovation and Research, Radiology, New York University School of Medicine. Electronic address: Chenyang.Li@nyulangone.org.
Arjun MasurkarCenter for Cognitive Neurology, Department of Neurology, New York University School of Medicine; Department of Neuroscience & Physiology, New York University School of Medicine; Neuroscience Institute, New York University School of Medicine. Electronic address: Arjun.Masurkar@nyulangone.org.
Yulin GeCenter for Biomedical Imaging, Radiology, New York University School of Medicine; Center for Advanced Imaging Innovation and Research, Radiology, New York University School of Medicine. Electronic address: Yulin.Ge@nyulangone.org.
Sungheon Gene KimDepartment of Radiology, Weill Cornell Medical College. Electronic address: sgk4001@med.cornell.edu.
Advanced Imaging Research (United States) · USCornell University · USNew York University · US

Funding

Clinical and Translational Science AwardUL1TR001873 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI REILLY, MUREDACH P · 2016 to 2025
$99.0M
Disparities in COVID Disease Severity and Outcomes in New York CityUL1TR002384 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JULIANNE L IMPERATO-MCGINLEY · 2017 to 2026
$86.2M
Research Education ComponentP30AG066512 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Mary Sherman Mittelman · 2020 to 2026
$28.4M
DCE MRI Study for Breast Cancer.R01CA160620 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI KIM, SUNGHEON GENE · 2012 to 2023
$5.4M
Gradient-Echo Spectroscopic Imaging Study of Saturated Fat and Breast CancerR01CA219964 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI KIM, SUNGHEON GENE, MOY, LINDA · 2018 to 2022
$2.3M
Diffusion MRI of Treatment Response for De-escalation of Radiation TherapyUH3CA228699 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI KIM, SUNGHEON GENE · 2021 to 2023
$1.2M
NCATS NIH HHS UL1 TR001873NCATS NIH HHS UL1 TR002384NCI NIH HHS R01 CA160620NCI NIH HHS R01 CA219964NCI NIH HHS UH3 CA228699NIA NIH HHS P30 AG066512
6 · The paper itself

Abstract

purposeIn Dynamic contrast-enhanced MRI (DCE-MRI), Arterial Input Function (AIF) has been shown to be a significant contributor to uncertainty in the estimation of kinetic parameters. This study is to assess the feasibility of using a deep learning network to estimate local Capillary Input Function (CIF) to estimate blood-brain barrier (BBB) permeability, while reducing the required scan time. MATERIALS AND

methodA total of 13 healthy subjects (younger (<40 y/o): 8, older (> 67 y/o): 5) were recruited and underwent 25-min DCE-MRI scans. The 25 min data were retrospectively truncated to 10 min to simulate a reduced scan time of 10 min. A deep learning network was trained to predict the CIF using simulated tissue contrast dynamics with two vascular transport models. The BBB permeability (PS) was measured using 3 methods: (i) C

resultsWhen compared to the reference method(C

conclusionsWe demonstrated the feasibility of estimating the capillary-level input functions using a deep learning network. We also showed that this method can be used to estimate subtle age-related changes in BBB permeability with reduced scan time, without compromising accuracy. Moreover, the trained deep learning network can automatically select CIF, reducing the potential uncertainty resulting from manual user-intervention.

Indexed as

Blood-Brain BarrierDeep LearningCapillary PermeabilityContrast MediaHumansMagnetic Resonance ImagingPermeabilityReproducibility of ResultsRetrospective StudiesContrast MediaAgingArterial input functionBBB permeabilityCapillary input functionDCE-MRIPharmacokinetic model analysis

Identifiers

PMID37507078
PMCPMC10475161
OpenAlexW4385304214

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.