Evidence map›Paper›PMID 37506195›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

The contributions of rare inherited and polygenic risk to ASD in multiplex families.

Matilde Cirnigliaro, Timothy S Chang, Stephanie A Arteaga, Laura Pérez-Cano, Elizabeth K Ruzzo, Aaron Gordon, Lucy K Bicks, Jae-Yoon Jung, Jennifer K Lowe, Dennis P Wall and 1 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 72 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
72citing papers in PubMed, 4 pooled it
20.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

72 citing papers in PubMed, 4 syntheses or guidelines pooled it, 100 citations in OpenAlex.

  1. Pooled it
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  12. Challenging the Developmental Substructure Model for Autism: A Perspective From Causal Statistics.Autism research : official journal of the International Society for Autism Research · 2026
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12 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Matilde CirnigliaroDepartment of Psychiatry and Biobehavioral Sciences, Semel Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0001-6151-330X
Timothy S ChangMovement Disorders Program, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0002-9225-9874
Stephanie A ArteagaProgram in Neurogenetics, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0003-1441-8849
Laura Pérez-CanoSTALICLA Discovery and Data Science Unit, World Trade Center, Barcelona 08039, Spain.
Elizabeth K RuzzoDepartment of Psychiatry and Biobehavioral Sciences, Semel Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.
Aaron GordonProgram in Neurogenetics, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.
Lucy K BicksProgram in Neurogenetics, Department of Neurology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0002-9884-0133
Jae-Yoon JungDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, CA 94304.
Jennifer K LoweDepartment of Psychiatry and Biobehavioral Sciences, Semel Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.ORCID 0000-0002-0010-6417
Dennis P WallDepartment of Pediatrics, Division of Systems Medicine, Stanford University, Stanford, CA 94304.
Daniel H GeschwindDepartment of Psychiatry and Biobehavioral Sciences, Semel Institute, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA 90095.
University of California, Los Angeles · USStanford University · US

Funding

New York Center for Collaborative Research In Common Disease Genomics: Genome Aggregation and Joint Variant Calling for CCDG Freeze2UM1HG008901 · NHGRI · NEW YORK GENOME CENTER · PI MANIATIS, THOMAS P, WIGLER, MICHAEL H · 2016 to 2020
$56.6M
Understanding Repetitive Behavior in AutismP50HD055784 · NICHD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI BOOKHEIMER, SUSAN Y · 2007 to 2021
$32.0M
Autism Genetics, Phase II: Increasing Representation of Human DiversityR01MH100027 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2013 to 2024
$31.7M
Predicting and Otimizing Language Outcomes in Minimally Verbal Children with Autism Spectrum DisorderP50DC018006 · NIDCD · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI KASARI, CONNIE L., TAGER-FLUSBERG, HELEN · 2019 to 2023
$12.3M
Genomewide Search--Autism Susceptibility Loci-supplementR01MH064547 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GESCHWIND, DANIEL H · 2002 to 2006
$9.6M
Center for Genomic and Phenomic Studies in AutismU24MH081810 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LAJONCHERE, CLARA M · 2007 to 2011
$8.3M
Rare Genetic Risk and Gene Networks in TauopathyK08AG065519 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CHANG, TIMOTHY S · 2020 to 2024
$887k
High Capacity Storage System for Computational BiologyS10OD011939 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI WOODS, ROGER P · 2012 to 2012
$598k
NHGRI NIH HHS UM1 HG008901NIA NIH HHS K08 AG065519NICHD NIH HHS P50 HD055784NIDCD NIH HHS P50 DC018006NIH HHS S10 OD011939NIMH NIH HHS R01 MH064547NIMH NIH HHS R01 MH100027NIMH NIH HHS U24 MH081810
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) has a complex genetic architecture involving contributions from both de novo and inherited variation. Few studies have been designed to address the role of rare inherited variation or its interaction with common polygenic risk in ASD. Here, we performed whole-genome sequencing of the largest cohort of multiplex families to date, consisting of 4,551 individuals in 1,004 families having two or more autistic children. Using this study design, we identify seven previously unrecognized ASD risk genes supported by a majority of rare inherited variants, finding support for a total of 74 genes in our cohort and a total of 152 genes after combined analysis with other studies. Autistic children from multiplex families demonstrate an increased burden of rare inherited protein-truncating variants in known ASD risk genes. We also find that ASD polygenic score (PGS) is overtransmitted from nonautistic parents to autistic children who also harbor rare inherited variants, consistent with combinatorial effects in the offspring, which may explain the reduced penetrance of these rare variants in parents. We also observe that in addition to social dysfunction, language delay is associated with ASD PGS overtransmission. These results are consistent with an additive complex genetic risk architecture of ASD involving rare and common variation and further suggest that language delay is a core biological feature of ASD.

Indexed as

Autism Spectrum DisorderLanguage Development DisordersChildGenetic Predisposition to DiseaseHumansMultifactorial InheritanceParentsWhole Genome Sequencingautism spectrum disorder (ASD)geneticsinheritedmultiplex familiespolygenic score (PGS)

Identifiers

PMID37506195
PMCPMC10400943
OpenAlexW4385335624

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.