Evidence map›Paper›PMID 37506031›Full record

ArticleThe Plant cell2023

Deciphering the regulatory network of the NAC transcription factor FvRIF, a key regulator of strawberry (Fragaria vesca) fruit ripening.

Xiaojing Li, Carmen Martín-Pizarro, Leilei Zhou, Bingzhu Hou, Yuying Wang, Yuanyue Shen, Bingbing Li, David Posé, Guozheng Qin

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
12.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 78 citations in OpenAlex.

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  4. QTL mapping for berry firmness and functional characterization of a prioritized candidate gene VvNAC83 in grape.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  14. Dual benefits ofHorticulture research · 2026
    Article
  15. MicroRNA164d suppresses the HvNAC92-HvHKT1;5 module to enhance salinity tolerance in barley.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Xiaojing LiKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093,China.ORCID 0000-0003-1660-3108
Carmen Martín-PizarroInstituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-Consejo Superior de Investigaciones Científicas, Departamento de Biología Molecular y Bioquímica, Facultad de Ciencias, UMA, Málaga 29071,Spain.ORCID 0000-0001-9305-3096
Leilei ZhouKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093,China.ORCID 0000-0002-8943-3296
Bingzhu HouKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093,China.ORCID 0000-0001-9662-1829
Yuying WangKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093,China.ORCID 0000-0002-3419-6967
Yuanyue ShenCollege of Plant Science and Technology, Beijing University of Agriculture, Beijing 102206,China.ORCID 0000-0002-1414-7324
Bingbing LiCollege of Horticulture, China Agricultural University, Beijing 100193,China.ORCID 0000-0002-9950-5185
David PoséInstituto de Hortofruticultura Subtropical y Mediterránea (IHSM), Universidad de Málaga-Consejo Superior de Investigaciones Científicas, Departamento de Biología Molecular y Bioquímica, Facultad de Ciencias, UMA, Málaga 29071,Spain.ORCID 0000-0003-3332-4661
Guozheng QinKey Laboratory of Plant Resources, Institute of Botany, Chinese Academy of Sciences, Beijing 100093,China.ORCID 0000-0003-3046-1177
Chinese Academy of Sciences · CNConsejo Superior de Investigaciones Científicas · ESBeijing University of Agriculture · CNChina Agricultural University · CN

Funding

European Research Council ERC-2014-Stg 638134
6 · The paper itself

Abstract

The NAC transcription factor ripening inducing factor (RIF) was previously reported to be necessary for the ripening of octoploid strawberry (Fragaria × ananassa) fruit, but the mechanistic basis of RIF-mediated transcriptional regulation and how RIF activity is modulated remains elusive. Here, we show that FvRIF in diploid strawberry, Fragaria vesca, is a key regulator in the control of fruit ripening and that knockout mutations of FvRIF result in a complete block of fruit ripening. DNA affinity purification sequencing coupled with transcriptome deep sequencing suggests that 2,080 genes are direct targets of FvRIF-mediated regulation, including those related to various aspects of fruit ripening. We provide evidence that FvRIF modulates anthocyanin biosynthesis and fruit softening by directly regulating the related core genes. Moreover, we demonstrate that FvRIF interacts with and serves as a substrate of MAP kinase 6 (FvMAPK6), which regulates the transcriptional activation function of FvRIF by phosphorylating FvRIF at Thr-310. Our findings uncover the FvRIF-mediated transcriptional regulatory network in controlling strawberry fruit ripening and highlight the physiological significance of phosphorylation modification on FvRIF activity in ripening.

Indexed as

FragariaTranscription FactorsFruitGene Expression Regulation, PlantPlant ProteinsTranscriptomePlant ProteinsTranscription Factors

Identifiers

PMID37506031
PMCPMC10615214
OpenAlexW4385340873

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.