Evidence map›Paper›PMID 37504081›Full record

ArticleBiosensors2023

A Prototype Assay Multiplexing SARS-CoV-2 3CL-Protease and Angiotensin-Converting Enzyme 2 for Saliva-Based Diagnostics in COVID-19.

Vallabh Suresh, Daniel A Sheik, Tyler C Detomasi, Tianqi Zhao, Theresa Zepeda, Shyam Saladi, Ummadisetti Chinna Rajesh, Kaleb Byers, Charles S Craik, Vincent Jo Davisson

Open access · goldAbstract read
In one paragraph

Article in Biosensors, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Vallabh SureshDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University College of Pharmacy, West Lafayette, IN 47907, USA.
Daniel A SheikAmplified Sciences, Inc., West Lafayette, IN 47906, USA.ORCID 0000-0002-4252-7850
Tyler C DetomasiDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94143, USA.ORCID 0000-0003-4390-108X
Tianqi ZhaoDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University College of Pharmacy, West Lafayette, IN 47907, USA.
Theresa ZepedaNeelyx Labs, Wood Dale, IL 60191, USA.
Shyam SaladiNeelyx Labs, Wood Dale, IL 60191, USA.
Ummadisetti Chinna RajeshAmplified Sciences, Inc., West Lafayette, IN 47906, USA.ORCID 0000-0002-0065-2223
Kaleb ByersAmplified Sciences, Inc., West Lafayette, IN 47906, USA.ORCID 0000-0003-0143-0582
Charles S CraikDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94143, USA.
Vincent Jo DavissonDepartment of Medicinal Chemistry and Molecular Pharmacology, Purdue University College of Pharmacy, West Lafayette, IN 47907, USA.ORCID 0000-0003-1182-0007
Purdue University West Lafayette · USUniversity of California, San Francisco · US

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI ANDREW D MESECAR · 1985 to 2026
$43.4M
Antiviral Lead Identification to Treat Filovirus InfectionsR01AI128364 · NIAID · PURDUE UNIVERSITY · PI DAVEY, ROBERT A, DAVISSON, VINCENT JO · 2019 to 2022
$2.6M
Robust Sequence-defined Nanocages with Protein-mimetic CavitiesR35GM147579 · NIGMS · UNIVERSITY OF VERMONT & ST AGRIC COLLEGE · PI Severin Thomas Schneebeli · 2022 to 2026
$1.9M
NIH HHS P30CA023168NIH HHS R01AI128364NIH HHS R35GM147579
6 · The paper itself

Abstract

With the current state of COVID-19 changing from a pandemic to being more endemic, the priorities of diagnostics will likely vary from rapid detection to stratification for the treatment of the most vulnerable patients. Such patient stratification can be facilitated using multiple markers, including SARS-CoV-2-specific viral enzymes, like the 3CL protease, and viral-life-cycle-associated host proteins, such as ACE2. To enable future explorations, we have developed a fluorescent and Raman spectroscopic SARS-CoV-2 3CL protease assay that can be run sequentially with a fluorescent ACE2 activity measurement within the same sample. Our prototype assay functions well in saliva, enabling non-invasive sampling. ACE2 and 3CL protease activity can be run with minimal sample volumes in 30 min. To test the prototype, a small initial cohort of eight clinical samples was used to check if the assay could differentiate COVID-19-positive and -negative samples. Though these small clinical cohort samples did not reach statistical significance, results trended as expected. The high sensitivity of the assay also allowed the detection of a low-activity 3CL protease mutant.

Indexed as

COVID-19Angiotensin-Converting Enzyme 2COVID-19 TestingCysteine EndopeptidasesHumansPeptide HydrolasesSalivaSARS-CoV-2Angiotensin-Converting Enzyme 2Cysteine EndopeptidasesPeptide HydrolasesCOVID-19enzymatic assaysproteases

Identifiers

PMID37504081
PMCPMC10377347
OpenAlexW4382202460

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.