Evidence map›Paper›PMID 37503053›Full record

ArticlebioRxiv : the preprint server for biology2023

Diallel panel reveals a significant impact of low-frequency genetic variants on gene expression variation in yeast.

Andreas Tsouris, Gauthier Brach, Anne Friedrich, Jing Hou, Joseph Schacherer

Open access · greenAbstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Andreas TsourisUniversité de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Gauthier BrachUniversité de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Anne FriedrichUniversité de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Jing HouUniversité de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Joseph SchachererUniversité de Strasbourg, CNRS, GMGM UMR 7156, Strasbourg, France.
Centre National de la Recherche Scientifique · FR

Funding

Species-wide survey of the phenotypic impact of genomic structural variation in yeastR01GM147040 · NIGMS · UNIVERSITY OF WASHINGTON · PI DUNHAM, MAITREYA J · 2022 to 2025
$1.1M
NIGMS NIH HHS R01 GM147040
6 · The paper itself

Abstract

Unraveling the genetic sources of gene expression variation is essential to better understand the origins of phenotypic diversity in natural populations. Genome-wide association studies identified thousands of variants involved in gene expression variation, however, variants detected only explain part of the heritability. In fact, variants such as low-frequency and structural variants (SVs) are poorly captured in association studies. To assess the impact of these variants on gene expression variation, we explored a half-diallel panel composed of 323 hybrids originated from pairwise crosses of 26 natural

Indexed as

dialleleQTLgene expressionlow-frequency variantsstructural variantsyeast

Identifiers

PMID37503053
PMCPMC10370210
OpenAlexW4385144290

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.