Evidence map›Paper›PMID 37502198›Full record

ArticleStochastic environmental research and risk assessment : research journal2023

A comparison of numerical approaches for statistical inference with stochastic models.

Marco Bacci, Jonas Sukys, Peter Reichert, Simone Ulzega, Carlo Albert

Abstract read
In one paragraph

Article in Stochastic environmental research and risk assessment : research journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Marco BacciSIAM, Eawag: Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland.
Jonas SukysSIAM, Eawag: Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland.
Peter ReichertSIAM, Eawag: Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland.
Simone UlzegaInstitute of Computational Life Sciences, ZHAW Zurich University of Applied Sciences, 8820 Wädenswil, Switzerland.
Carlo AlbertSIAM, Eawag: Swiss Federal Institute of Aquatic Science and Technology, 8600 Dübendorf, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Due to our limited knowledge about complex environmental systems, our predictions of their behavior under different scenarios or decision alternatives are subject to considerable uncertainty. As this uncertainty can often be relevant for societal decisions, the consideration, quantification and communication of it is very important. Due to internal stochasticity, often poorly known influence factors, and only partly known mechanisms, in many cases, a stochastic model is needed to get an adequate description of uncertainty. As this implies the need to infer constant parameters, as well as the time-course of stochastic model states, a very high-dimensional inference problem for model calibration has to be solved. This is very challenging from a methodological and a numerical perspective. To illustrate aspects of this problem and show options to successfully tackle it, we compare three numerical approaches: Hamiltonian Monte Carlo, Particle Markov Chain Monte Carlo, and Conditional Ornstein-Uhlenbeck Sampling. As a case study, we select the analysis of hydrological data with a stochastic hydrological model. We conclude that the performance of the investigated techniques is comparable for the analyzed system, and that also generality and practical considerations may be taken into account to guide the choice of which technique is more appropriate for a particular application. Supplementary Information: The online version contains supplementary material available at 10.1007/s00477-023-02434-z.

Indexed as

Bayesian inferenceCalibrationGibbs samplingHamiltonian Monte CarloParticle Markov Chain Monte CarloStochastic modelUncertainty quantification

Identifiers

PMID37502198
PMCPMC10368571

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.