Evidence map›Paper›PMID 37500658›Full record

ArticleNature communications2023

Ion selectivity and rotor coupling of the Vibrio flagellar sodium-driven stator unit.

Haidai Hu, Philipp F Popp, Mònica Santiveri, Aritz Roa-Eguiara, Yumeng Yan, Freddie J O Martin, Zheyi Liu, Navish Wadhwa, Yong Wang, Marc Erhardt and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Article
  3. Advances in understanding Ton and Tol system motor proteins.Biochemical Society transactions · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Structural insight into sodium ion pathway in the bacterial flagellar stator from marineProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. A very versatile molecular machine.Journal of bacteriology · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Tuning the stator subunit of the flagellar motor with coiled-coil engineering.Protein science : a publication of the Protein Society · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Haidai HuStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.
Philipp F PoppInstitute for Biology/Molecular Microbiology, Humboldt-Universität zu Berlin, Philippstr. 13, 10115, Berlin, Germany.
Mònica SantiveriStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.ORCID 0000-0001-5693-031X
Aritz Roa-EguiaraStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.ORCID 0000-0003-3962-7583
Yumeng YanStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.
Freddie J O MartinStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark.ORCID 0000-0001-6456-2860
Zheyi LiuCollege of Life Sciences, Zhejiang University, Hangzhou, 310027, China.
Navish WadhwaDepartment of Physics, Arizona State University, Tempe, AZ, 85287, USA.ORCID 0000-0002-3514-5256
Yong WangCollege of Life Sciences, Zhejiang University, Hangzhou, 310027, China.ORCID 0000-0001-9156-0377
Marc ErhardtInstitute for Biology/Molecular Microbiology, Humboldt-Universität zu Berlin, Philippstr. 13, 10115, Berlin, Germany.ORCID 0000-0001-6292-619X
Nicholas M I TaylorStructural Biology of Molecular Machines Group, Protein Structure & Function Program, Novo Nordisk Foundation Center for Protein Research, Faculty of Health and Medical Sciences, University of Copenhagen, Blegdamsvej 3B, 2200, Copenhagen, Denmark. nicholas.taylor@cpr.ku.dk.ORCID 0000-0003-0761-4921

Funding

Identifying the mechanisms of mechanosensing by the bacterial flagellar motorR00GM134124 · NIGMS · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI WADHWA, NAVISH · 2023 to 2025
$747k
European Research Council 864971NIGMS NIH HHS R00 GM134124
6 · The paper itself

Abstract

Bacteria swim using a flagellar motor that is powered by stator units. Vibrio spp. are highly motile bacteria responsible for various human diseases, the polar flagella of which are exclusively driven by sodium-dependent stator units (PomAB). However, how ion selectivity is attained, how ion transport triggers the directional rotation of the stator unit, and how the stator unit is incorporated into the flagellar rotor remained largely unclear. Here, we have determined by cryo-electron microscopy the structure of Vibrio PomAB. The electrostatic potential map uncovers sodium binding sites, which together with functional experiments and molecular dynamics simulations, reveal a mechanism for ion translocation and selectivity. Bulky hydrophobic residues from PomA prime PomA for clockwise rotation. We propose that a dynamic helical motif in PomA regulates the distance between PomA subunit cytoplasmic domains, stator unit activation, and torque transmission. Together, our study provides mechanistic insights for understanding ion selectivity and rotor incorporation of the stator unit of the bacterial flagellum.

Indexed as

Bacterial ProteinsSodiumCryoelectron MicroscopyFlagellaHumansMolecular Motor ProteinsPolymethacrylic AcidsVibrio alginolyticusBacterial ProteinsMolecular Motor ProteinsPolymethacrylic Acidspoly(n-octyl methacrylate)Sodium

Identifiers

PMID37500658
PMCPMC10374538

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.