Evidence map›Paper›PMID 37498820›Full record

ArticlePLoS genetics2023

A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva.

Anastasia Shatilovich, Vamshidhar R Gade, Martin Pippel, Tarja T Hoffmeyer, Alexei V Tchesunov, Lewis Stevens, Sylke Winkler, Graham M Hughes, Sofia Traikov, Michael Hiller and 4 more

Erratum issuedAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Review
  2. Article
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  5. Review
  6. Understanding the factors regulating host-microbiome interactions usingPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  7. Description ofJournal of nematology · 2024
    Article
  8. Article
  9. Article
  10. Article
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  14. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

14 authors.

Anastasia ShatilovichInstitute of Physicochemical and Biological Problems in Soil Science RAS, Pushchino, Russia.ORCID 0000-0003-1858-0114
Vamshidhar R GadeMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.
Martin PippelCenter for Systems Biology, Dresden, Germany.ORCID 0000-0002-8134-5929
Tarja T HoffmeyerInstitute for Zoology, University of Cologne, Köln, Germany.ORCID 0000-0002-1568-0841
Alexei V TchesunovDepartment of Invertebrate Zoology, Lomonosov Moscow State University, Moscow, Russia.ORCID 0000-0003-2365-910X
Lewis StevensTree of Life, Wellcome Sanger Institute, Cambridge, United Kingdom.
Sylke WinklerMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-0915-3316
Graham M HughesSchool of Biology and Environmental Science, University College Dublin, Belfield, Dublin, Ireland.
Sofia TraikovMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0003-2319-8454
Michael HillerCenter for Systems Biology, Dresden, Germany.
Elizaveta RivkinaInstitute of Physicochemical and Biological Problems in Soil Science RAS, Pushchino, Russia.ORCID 0000-0001-7949-8056
Philipp H SchifferInstitute for Zoology, University of Cologne, Köln, Germany.
Eugene W MyersCenter for Systems Biology, Dresden, Germany.
Teymuras V KurzchaliaMax Planck Institute for Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-7791-5810

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Some organisms in nature have developed the ability to enter a state of suspended metabolism called cryptobiosis when environmental conditions are unfavorable. This state-transition requires execution of a combination of genetic and biochemical pathways that enable the organism to survive for prolonged periods. Recently, nematode individuals have been reanimated from Siberian permafrost after remaining in cryptobiosis. Preliminary analysis indicates that these nematodes belong to the genera Panagrolaimus and Plectus. Here, we present precise radiocarbon dating indicating that the Panagrolaimus individuals have remained in cryptobiosis since the late Pleistocene (~46,000 years). Phylogenetic inference based on our genome assembly and a detailed morphological analysis demonstrate that they belong to an undescribed species, which we named Panagrolaimus kolymaensis. Comparative genome analysis revealed that the molecular toolkit for cryptobiosis in P. kolymaensis and in C. elegans is partly orthologous. We show that biochemical mechanisms employed by these two species to survive desiccation and freezing under laboratory conditions are similar. Our experimental evidence also reveals that C. elegans dauer larvae can remain viable for longer periods in suspended animation than previously reported. Altogether, our findings demonstrate that nematodes evolved mechanisms potentially allowing them to suspend life over geological time scales.

Indexed as

NematodaPermafrostAnimalsCaenorhabditis elegansHumansLarvaPhylogeny

Identifiers

PMID37498820
PMCPMC10374039

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.