Evidence map›Paper›PMID 37497662›Full record

ArticleEMBO reports2023

Branched-chain amino acid synthesis is coupled to TOR activation early in the cell cycle in yeast.

Heidi M Blank, Carsten Reuse, Kerstin Schmidt-Hohagen, Staci E Hammer, Karsten Hiller, Michael Polymenis

Open access · greenAbstract read
In one paragraph

Article in EMBO reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. TOR Complex 1: Orchestrating Nutrient Signaling and Cell Cycle Progression.International journal of molecular sciences · 2023
    Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Heidi M BlankDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.ORCID 0000-0002-2251-5246
Carsten ReuseDepartment of Bioinformatics and Biochemistry, BRICS, Technische Universität Braunschweig, Braunschweig, Germany.
Kerstin Schmidt-HohagenDepartment of Bioinformatics and Biochemistry, BRICS, Technische Universität Braunschweig, Braunschweig, Germany.
Staci E HammerDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.ORCID 0000-0001-5874-5521
Karsten HillerDepartment of Bioinformatics and Biochemistry, BRICS, Technische Universität Braunschweig, Braunschweig, Germany.ORCID 0000-0001-9322-5820
Michael PolymenisDepartment of Biochemistry and Biophysics, Texas A&M University, College Station, TX, USA.ORCID 0000-0003-1507-0936
Technische Universität Braunschweig · DETexas A&M University · US

Funding

Coupling Of Protein Synthesis With Cell DivisionR01GM123139 · NIGMS · TEXAS A&M AGRILIFE RESEARCH · PI POLYMENIS, MICHAEL S · 2017 to 2024
$2.9M
NIGMS NIH HHS R01 GM123139
6 · The paper itself

Abstract

How cells coordinate their metabolism with division determines the rate of cell proliferation. Dynamic patterns of metabolite synthesis during the cell cycle are unexplored. We report the first isotope tracing analysis in synchronous, growing budding yeast cells. Synthesis of leucine, a branched-chain amino acid (BCAA), increases through the G1 phase of the cell cycle, peaking later during DNA replication. Cells lacking Bat1, a mitochondrial aminotransferase that synthesizes BCAAs, grow slower, are smaller, and are delayed in the G1 phase, phenocopying cells in which the growth-promoting kinase complex TORC1 is moderately inhibited. Loss of Bat1 lowers the levels of BCAAs and reduces TORC1 activity. Exogenous provision of valine and, to a lesser extent, leucine to cells lacking Bat1 promotes cell division. Valine addition also increases TORC1 activity. In wild-type cells, TORC1 activity is dynamic in the cell cycle, starting low in early G1 but increasing later in the cell cycle. These results suggest a link between BCAA synthesis from glucose to TORC1 activation in the G1 phase of the cell cycle.

Indexed as

Amino AcidsSaccharomyces cerevisiaeCell CycleG1 PhaseGlucoseLeucineMitochondrial ProteinsProtein Serine-Threonine KinasesSaccharomyces cerevisiae ProteinsTransaminasesAmino AcidsBAT1 protein, S cerevisiaeGlucoseLeucineMitochondrial ProteinsProtein Serine-Threonine KinasesSaccharomyces cerevisiae Proteinstarget of rapamycin protein, S cerevisiaeTransaminasesBCAABCATcell sizeisotope tracingTORC1

Identifiers

PMID37497662
PMCPMC10481666
OpenAlexW4385295091

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.