Evidence map›Paper›PMID 37497377›Full record

ArticleACS catalysis2023

Mechanistic and Structural Insights into a Divergent PLP-Dependent l-Enduracididine Cyclase from a Toxic Cyanobacterium.

Jennifer L Cordoza, Percival Yang-Ting Chen, Linnea R Blaustein, Stella T Lima, Marli F Fiore, Jonathan R Chekan, Bradley S Moore, Shaun M K McKinnie

Open access · hybridAbstract read
In one paragraph

Article in ACS catalysis, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Biosynthesis of guanidine-containing natural products in cyanobacteria.Journal of industrial microbiology & biotechnology · 2024
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Jennifer L CordozaDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States.ORCID https://orcid.org/0000-0001-8589-9200
Percival Yang-Ting ChenCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, La Jolla, California 92093, United States.ORCID https://orcid.org/0000-0001-7362-9801
Linnea R BlausteinDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States.
Stella T LimaCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, La Jolla, California 92093, United States.
Marli F FioreCenter for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, São Paulo 13416-000, Brazil.ORCID https://orcid.org/0000-0003-2555-7967
Jonathan R ChekanCenter for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, La Jolla, California 92093, United States.ORCID https://orcid.org/0000-0003-4651-0594
Bradley S MooreDepartment of Chemistry and Biochemistry, University of North Carolina at Greensboro, Greensboro, North Carolina 27402, United States.ORCID https://orcid.org/0000-0002-4652-1253
Shaun M K McKinnieDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, California 95064, United States.ORCID https://orcid.org/0000-0001-6776-6455
Scripps Institution of Oceanography · USUniversity of California, Santa Cruz · USUniversidade de São Paulo · BRUniversity of North Carolina at Greensboro · US

Funding

Baccalaureate Bridge to the Biomedical Sciences Program (ACCESS)R25GM051765 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI CAMARA, JASON N., CREWS, PHIL · 1994 to 2023
$5.6M
Biosynthesis and Monitoring of the Cyanobacterial Toxin Anatoxin-a(s)R21ES032056 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI MOORE, BRADLEY S · 2020 to 2021
$434k
NIEHS NIH HHS R21 ES032056NIGMS NIH HHS R25 GM051765
6 · The paper itself

Abstract

Cyclic arginine noncanonical amino acids (ncAAs) are found in several actinobacterial peptide natural products with therapeutically useful antibacterial properties. The preparation of ncAAs like enduracididine and capreomycidine currently takes multiple biosynthetic or chemosynthetic steps, thus limiting the commercial availability and applicability of these cyclic guanidine-containing amino acids. We recently discovered and characterized the biosynthetic pathway of guanitoxin, a potent freshwater cyanobacterial neurotoxin, that contains an arginine-derived cyclic guanidine phosphate within its highly polar structure. The ncAA l-enduracididine is an early intermediate in guanitoxin biosynthesis and is produced by GntC, a unique pyridoxal-5'-phosphate (PLP)-dependent enzyme. GntC catalyzes a cyclodehydration from a stereoselectively γ-hydroxylated l-arginine precursor via a reaction that functionally and mechanistically diverges from previously established actinobacterial cyclic arginine ncAA pathways. Herein, we interrogate l-enduracididine biosynthesis from the cyanobacterium

Identifiers

PMID37497377
PMCPMC10367076
OpenAlexW4383875873

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.