Evidence map›Paper›PMID 37495985›Full record

ArticleBMC genomic data2023

Genetic dissection of root architectural plasticity and identification of candidate loci in response to drought stress in bread wheat.

Nurealam Siddiqui, Melesech T Gabi, Mohammad Kamruzzaman, Abebaw M Ambaw, Tesfaye J Teferi, Said Dadshani, Jens Léon, Agim Ballvora

Open access · goldAbstract read
In one paragraph

Article in BMC genomic data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 10 citations in OpenAlex.

  1. Maize LipoxygenasePlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 2 countries.

Nurealam SiddiquiInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Melesech T GabiInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Mohammad KamruzzamanInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Abebaw M AmbawInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Tesfaye J TeferiInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Said DadshaniINRES-Plant Nutrition, University of Bonn, 53115, Bonn, Germany.
Jens LéonInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany.
Agim BallvoraInstitute of Crop Science and Resource Conservation (INRES)-Plant Breeding, University of Bonn, 53115, Bonn, Germany. ballvora@uni-bonn.de.
University of Bonn · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe frequency of droughts has dramatically increased over the last 50 years, causing yield declines in cereals, including wheat. Crop varieties with efficient root systems show great potential for plant adaptation to drought stress, however; genetic control of root systems in wheat under field conditions is not yet well understood.

resultsNatural variation in root architecture plasticity (phenotypic alteration due to changing environments) was dissected under field-based control (well-irrigated) and drought (rain-out shelter) conditions by a genome-wide association study using 200 diverse wheat cultivars. Our results revealed root architecture and plasticity traits were differentially responded to drought stress. A total of 25 marker-trait associations (MTAs) underlying natural variations in root architectural plasticity were identified in response to drought stress. They were abundantly distributed on chromosomes 1 A, 1B, 2 A, 2B, 3 A, 3B, 4B, 5 A, 5D, 7 A and 7B of the wheat genome. Gene ontology annotation showed that many candidate genes associated with plasticity were involved in water-transport and water channel activity, cellular response to water deprivation, scavenging reactive oxygen species, root growth and development and hormone-activated signaling pathway-transmembrane transport, indicating their response to drought stress. Further, in silico transcript abundance analysis demonstrated that root plasticity-associated candidate genes were highly expressed in roots across different root growth stages and under drought treatments.

conclusionOur results suggest that root phenotypic plasticity is highly quantitative, and the corresponding loci are associated with drought stress that may provide novel ways to enable root trait breeding.

Indexed as

DroughtsGenome-Wide Association StudyBreadChromosome MappingPlant BreedingTriticumCandidate lociDrought stressGWASRoot phenotypic plasticitySNPWheat

Identifiers

PMID37495985
PMCPMC10373353
OpenAlexW4385295493

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.