Evidence map›Paper›PMID 37495613›Full record

ArticleScientific reports2023

Development of quantitative multiplex RT-qPCR one step assay for detection of hepatitis delta virus.

Jackson Alves da Silva Queiroz, Tárcio Peixoto Roca, Rutilene Barbosa Souza, Luiz Fellype Alves de Souza, Ana Maísa Passos-Silva, André Luiz Ferreira da Silva, Eugênia de Castro E Silva, Lourdes Maria Pinheiro Borzacov, Rita de Cássia Pontello Rampazzo, Soraya Dos Santos Pereira and 6 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Jackson Alves da Silva Queiroz *Fundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil.
Tárcio Peixoto Roca *Fundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil.
Rutilene Barbosa SouzaCentro de Infectologia Charles Merieux & Laboratório Rodolphe Merieux (FUNDHACRE), Rio Branco, 69918-340, Brazil.
Luiz Fellype Alves de SouzaPrograma de Pós-Graduação em Medicina Tropical, Instituto Oswaldo Cruz/IOC, FIOCRUZ, 21041-250, Rio de Janeiro, Brazil.
Ana Maísa Passos-SilvaFundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil.
André Luiz Ferreira da SilvaFundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil.
Eugênia de Castro E SilvaPrograma de Pós-Graduação em Medicina Tropical, Instituto Oswaldo Cruz/IOC, FIOCRUZ, 21041-250, Rio de Janeiro, Brazil.
Lourdes Maria Pinheiro BorzacovCentro de Pesquisa em Medicina Tropical - CEPEM, Porto Velho, 76812-329, Brazil.
Rita de Cássia Pontello RampazzoInstituto de Biologia Molecular do Paraná - IBMP, 81350-010, Curitiba, Brazil.
Soraya Dos Santos PereiraFundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil.
Thor Oliveira DantasUniversidade Federal do Acre - UFAC, Rio Branco, 69915-900, Brazil.
Janaína MazaroLaboratório Central de Saúde Pública do Acre - LACEN/AC, Rio Branco, 69900-614, Brazil.
Lívia Melo VillarPrograma de Pós-Graduação em Medicina Tropical, Instituto Oswaldo Cruz/IOC, FIOCRUZ, 21041-250, Rio de Janeiro, Brazil.
Juan Miguel Villalobos SalcedoUniversidade Federal de Rondônia - UNIR, Porto Velho, 76801-974, Brazil.
Daniel Archimedes da MattaCentro de Infectologia Charles Merieux & Laboratório Rodolphe Merieux (FUNDHACRE), Rio Branco, 69918-340, Brazil.
Deusilene VieiraFundação Oswaldo Cruz Rondônia FIOCRUZ/RO, Rua da Beira, 7176, Porto Velho, 76812-245, Brazil. deusilene.vieira@fiocruz.br.ORCID 0000-0001-9817-724X
Universidade Federal de Rondônia · BRFundação Oswaldo Cruz · BRBrazilian Agricultural Research Corporation · BRUniversidade Federal do Acre · BRInstituto de Biologia Molecular do Paraná · BRUniversidade Federal da Bahia · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis Delta is a disease caused by exposure to hepatitis B (HBV) and hepatitis D (HDV) viruses, usually with a more severe clinical outcome when compared to an HBV monoinfection. To date, the real prevalence of HDV infection is underestimated and detection methods are poorly available, especially in more endemic regions. Therefore, a one-step RT-qPCR method for quantification of HDV-RNA was developed. Biological samples were selected between 2017 and 2023 from patients at the Ambulatório Especializado em Hepatites Virais of the Centro de Pesquisa em Medicina Tropical de Rondônia and Serviço de Assistência Especializada and underwent the test developed by this study and a second quantitative RT-qPCR assay. The slope of the initial quantitative assay was - 3.321 with an efficiency of 100.04% and amplification factor equal to 2. Analysis of the repeatability data revealed a Limit of Quantification of 5 copies/reaction and Limit of Detection (95%) of 2.83 copies per reaction. In the diagnostic sensitivity tests, there was an accuracy of 97.37% when compared to the reference test. This assay proved to be highly efficient and reproducible, making it a valuable tool to monitor hepatitis Delta patients and assess the risk of disease progression, as well as the effectiveness of treatment.

Indexed as

Hepatitis AHepatitis BHepatitis DHepatitis B virusHepatitis Delta VirusHumansRNA, ViralRNA, Viral

Identifiers

PMID37495613
PMCPMC10372040
OpenAlexW4385272545

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.