Evidence map›Paper›PMID 37493806›Full record

ArticleChromosoma2023

Cross-species chromosome painting and repetitive DNA mapping illuminate the karyotype evolution in true crocodiles (Crocodylidae).

Vanessa Sales-Oliveira, Marie Altmanová, Václav Gvoždík, Rafael Kretschmer, Tariq Ezaz, Thomas Liehr, Niklas Padutsch, Gabriel Badjedjea, Ricardo Utsunomia, Alongklod Tanomtong and 1 more

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Article in Chromosoma, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 9 institutions in 6 countries.

Vanessa Sales-OliveiraDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil.
Marie AltmanováInstitute of Animal Physiology and Genetics, Czech Academy of Sciences, 27721, Liběchov, Czech Republic.
Václav GvoždíkInstitute of Vertebrate Biology of the Czech Academy of Sciences, Brno, Czech Republic.
Rafael KretschmerDepartamento de Ecologia, Zoologia e Genética, Instituto de Biologia, Universidade Federal de Pelotas, Pelotas, Rio Grande do Sul, Brazil.
Tariq EzazInstitute for Applied Ecology, University of Canberra, Canberra, Australia.
Thomas LiehrInstitute of Human Genetics, Jena University Hospital, Jena, Germany.
Niklas PadutschInstitute of Human Genetics, Jena University Hospital, Jena, Germany.
Gabriel BadjedjeaDepartment of Aquatic Ecology, Biodiversity Monitoring Center, University of Kisangani, Kisangani, Democratic Republic of the Congo.
Ricardo UtsunomiaFaculdade de Ciências, UNESP, Bauru, São Paulo, Brazil.
Alongklod TanomtongDepartment of Biology Faculty of Science, Khon Kaen University, Muang, Khon Kaen, 40002, Thailand.
Marcelo CioffiDepartamento de Genética e Evolução, Universidade Federal de São Carlos, São Carlos, São Paulo, Brazil. mbcioffi@ufscar.br.
Jena University Hospital · DECharles University · CZKhon Kaen University · THNational Museum · CZUniversidade Estadual Paulista (Unesp) · BRUniversidade Federal de Pelotas · BRUniversidade Federal de São Carlos · BRUniversité de Kisangani · CDUniversity of Canberra · AU

Funding

Conselho Nacional de Desenvolvimento Científico e Tecnológico 200401/2022-0Conselho Nacional de Desenvolvimento Científico e Tecnológico 302928/2021-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2020/11772-8
6 · The paper itself

Abstract

Crocodilians have maintained very similar karyotype structures and diploid chromosome numbers for around 100 million years, with only minor variations in collinearity. Why this karyotype structure has largely stayed unaltered for so long is unclear. In this study, we analyzed the karyotypes of six species belonging to the genera Crocodylus and Osteolaemus (Crocodylidae, true crocodiles), among which the Congolian endemic O. osborni was included and investigated. We utilized various techniques (differential staining, fluorescence in situ hybridization with repetitive DNA and rDNA probes, whole chromosome painting, and comparative genomic hybridization) to better understand how crocodile chromosomes evolved. We studied representatives of three of the four main diploid chromosome numbers found in crocodiles (2n = 30/32/38). Our data provided new information about the species studied, including the identification of four major chromosomal rearrangements that occurred during the karyotype diversification process in crocodiles. These changes led to the current diploid chromosome numbers of 2n = 30 (fusion) and 2n = 38 (fissions), derived from the ancestral state of 2n = 32. The conserved cytogenetic tendency in crocodilians, where extant species keep near-ancestral state, contrasts with the more dynamic karyotype evolution seen in other major reptile groups.

Indexed as

Alligators and CrocodilesAnimalsChromosome PaintingComparative Genomic HybridizationEvolution, MolecularIn Situ Hybridization, FluorescenceKaryotypeChromosomeCrocodyliaCytogenomicsFISHMolecular cytogeneticsWCP

Identifiers

PMID37493806
OpenAlexW4385264298

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.