Evidence map›Paper›PMID 37493618›Full record

ArticlemSphere2023

A polysaccharide utilization locus from

Zijia Lu, Alma Kvammen, He Li, Mengshu Hao, Annie R Inman, Vincent Bulone, Lauren S McKee

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 21 citations in OpenAlex.

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  7. International journal of systematic and evolutionary microbiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Zijia Lu *Department of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
Alma Kvammen *Department of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
He LiDepartment of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
Mengshu HaoDepartment of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
Annie R InmanDepartment of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
Vincent BuloneDepartment of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.
Lauren S McKeeDepartment of Chemistry, Division of Glycoscience, KTH Royal Institute of Technology , Stockholm, Sweden.ORCID 0000-0002-3372-8773
KTH Royal Institute of Technology · SEFlinders University · AUWallenberg Wood Science Center · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In nature, complex carbohydrates are rarely found as pure isolated polysaccharides. Instead, bacteria in competitive environments are presented with glycans embedded in heterogeneous matrices such as plant or microbial cell walls. Members of the Bacteroidota phylum thrive in such ecosystems because they are efficient at extracting nutrients from complex substrates, secreting consortia of synergistic enzymes to release metabolizable sugars. Carbohydrate-binding modules (CBMs) are used to target enzymes to substrates, enhancing reaction rate and product release. Additionally, genome organizational tools like polysaccharide utilization loci (PULs) ensure that the appropriate set of enzymes is produced when needed. In this study, we show that the soil bacterium

Indexed as

beta-GlucansChitinasesBacteroidetesCell WallChitinEcosystemGlucansPolysaccharidesbeta-GlucansChitinChitinasesGlucansPolysaccharidesBacteroidotacarbohydrate-binding modulechitinChitinophagaglycoside hydrolasepolysaccharide utilization locusβ-1,3-glucan

Identifiers

PMID37493618
PMCPMC10449523
OpenAlexW4385264806

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.