Evidence map›Paper›PMID 37493604›Full record

ArticleNucleic acids research2023

CSDE1 promotes miR-451 biogenesis.

Pavan Kumar Kakumani, Yunkoo Ko, Sushmitha Ramakrishna, Grace Christopher, Maria Dodgson, Jatin Shrinet, Louis-Mathieu Harvey, Chanseok Shin, Martin J Simard

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. The biogenesis and regulation of animal microRNAs.Nature reviews. Molecular cell biology · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Regulatory role of RNA-binding proteins in microRNA biogenesis.Frontiers in molecular biosciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Pavan Kumar KakumaniDepartment of Biochemistry, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's NL A1C 5S7, Canada.ORCID 0000-0002-8755-860X
Yunkoo KoDepartment of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea.
Sushmitha RamakrishnaDepartment of Biochemistry, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's NL A1C 5S7, Canada.
Grace ChristopherDepartment of Biochemistry, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's NL A1C 5S7, Canada.
Maria DodgsonDepartment of Biochemistry, Memorial University of Newfoundland, 45 Arctic Avenue, St. John's NL A1C 5S7, Canada.
Jatin ShrinetDepartment of Biological Science, Florida State University, 319 Stadium Drive, Tallahassee, FL 32306-4295, USA.
Louis-Mathieu HarveyOncology Division, Centre Hospitalier Universitaire de Québec-Université Laval Research Center (L'Hôtel-Dieu de Québec), Quebec City, Québec G1R 3S3, Canada.
Chanseok ShinDepartment of Agricultural Biotechnology, Seoul National University, Seoul 08826, Republic of Korea.
Martin J SimardOncology Division, Centre Hospitalier Universitaire de Québec-Université Laval Research Center (L'Hôtel-Dieu de Québec), Quebec City, Québec G1R 3S3, Canada.
Memorial University of Newfoundland · CACentre hospitalier universitaire de Québec · CASeoul National University · KRFlorida State University · US

Funding

CIHR
6 · The paper itself

Abstract

MicroRNAs are sequentially processed by RNase III enzymes Drosha and Dicer. miR-451 is a highly conserved miRNA in vertebrates which bypasses Dicer processing and instead relies on AGO2 for its maturation. miR-451 is highly expressed in erythrocytes and regulates the differentiation of erythroblasts into mature red blood cells. However, the mechanistic details underlying miR-451 biogenesis in erythrocytes remains obscure. Here, we report that the RNA binding protein CSDE1 which is required for the development of erythroblasts into erythrocytes, controls the expression of miR-451 in erythroleukemia cells. CSDE1 binds miR-451 and regulates AGO2 processing of pre-miR-451 through its N-terminal domains. CSDE1 further interacts with PARN and promotes the trimming of intermediate miR-451 to the mature length. Together, our results demonstrate that CSDE1 promotes biogenesis of miR-451 in erythroid progenitors.

Indexed as

MicroRNAsAnimalsDNA-Binding ProteinsHumansRibonuclease IIIRNA-Binding ProteinsCSDE1 protein, humanDNA-Binding ProteinsMicroRNAsMIRN451 microRNA, humanRibonuclease IIIRNA-Binding Proteins

Identifiers

PMID37493604
PMCPMC10516617
OpenAlexW4385264556

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.