Evidence map›Paper›PMID 37491529›Full record

ArticleNature communications2023

Sequestration of histidine kinases by non-cognate response regulators establishes a threshold level of stimulation for bacterial two-component signaling.

Gaurav D Sankhe, Rubesh Raja, Devendra Pratap Singh, Sneha Bheemireddy, Subinoy Rana, P J Athira, Narendra M Dixit, Deepak Kumar Saini

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Tamoxifen inhibits histidine kinases ofMicrobiology spectrum · 2026
    Article
  3. Review
  4. The BaeS/BaeR two-component system enhancesFrontiers in cellular and infection microbiology · 2026
    Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gaurav D Sankhe *Centre for Biosystems Science and Engineering, Indian Institute of Science, Bengaluru, India.
Rubesh Raja *Department of Chemical Engineering, Indian Institute of Science, Bengaluru, India.ORCID 0000-0002-3204-0061
Devendra Pratap Singh *Department of Developmental Biology and Genetics, Indian Institute of Science, Bengaluru, India.
Sneha BheemireddyMolecular Biophysics Unit, Indian Institute of Science, Bengaluru, India.ORCID 0000-0002-9889-4588
Subinoy RanaMaterials Research Centre, Indian Institute of Science, Bengaluru, India.ORCID 0000-0002-8039-1149
P J AthiraDepartment of Developmental Biology and Genetics, Indian Institute of Science, Bengaluru, India.
Narendra M DixitCentre for Biosystems Science and Engineering, Indian Institute of Science, Bengaluru, India. narendra@iisc.ac.in.ORCID 0000-0002-2145-9828
Deepak Kumar SainiCentre for Biosystems Science and Engineering, Indian Institute of Science, Bengaluru, India. deepaksaini@iisc.ac.in.ORCID 0000-0001-6671-7256
Indian Institute of Science Bangalore · IN

Funding

Wellcome Trust
6 · The paper itself

Abstract

Bacterial two-component systems (TCSs) consist of a sensor histidine kinase (HK) that perceives a specific signal, and a cognate response regulator (RR) that modulates the expression of target genes. Positive autoregulation improves TCS sensitivity to stimuli, but may trigger disproportionately large responses to weak signals, compromising bacterial fitness. Here, we combine experiments and mathematical modelling to reveal a general design that prevents such disproportionate responses: phosphorylated HKs (HK~Ps) can be sequestered by non-cognate RRs. We study five TCSs of Mycobacterium tuberculosis and find, for all of them, non-cognate RRs that show higher affinity than cognate RRs for HK~Ps. Indeed, in vitro assays show that HK~Ps preferentially bind higher affinity non-cognate RRs and get sequestered. Mathematical modelling indicates that this sequestration would introduce a 'threshold' stimulus strength for eliciting responses, thereby preventing responses to weak signals. Finally, we construct tunable expression systems in Mycobacterium bovis BCG to show that higher affinity non-cognate RRs suppress responses in vivo.

Indexed as

Bacterial ProteinsHistidineBacteriaHistidine KinaseSignal TransductionBacterial ProteinsHistidineHistidine Kinase

Identifiers

PMID37491529
PMCPMC10368727
OpenAlexW4385236238

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.