Evidence map›Paper›PMID 37486356›Full record

ArticleThe Plant cell2023

Allelic compatibility in plant immune receptors facilitates engineering of new effector recognition specificities.

Adam R Bentham, Juan Carlos De la Concepcion, Javier Vega Benjumea, Jiorgos Kourelis, Sally Jones, Melanie Mendel, Jack Stubbs, Clare E M Stevenson, Josephine H R Maidment, Mark Youles and 3 more

Open access · hybridAbstract read
In one paragraph

Article in The Plant cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
  2. Structure-informed engineering of plant-microbe interactions.The Plant journal : for cell and molecular biology · 2026
    Review
  3. Natural variation inScience advances · 2026
    Article
  4. Article
  5. How to frustrate a plant pathogen.The Plant journal : for cell and molecular biology · 2026
    Review
  6. Article
  7. Plant NLRs are getting into higher-order architectures.The Plant journal : for cell and molecular biology · 2026
    Review
  8. Review
  9. Article
  10. Precision Editing of NLRS Improves Effector Recognition for Enhanced Disease Resistance.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  11. TheProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Bioengineering a plant NLR immune receptor with a robust binding interface toward a conserved fungal pathogen effector.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Adam R BenthamDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0001-5906-0962
Juan Carlos De la ConcepcionDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-7642-8375
Javier Vega BenjumeaDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-3988-1656
Jiorgos KourelisThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-9007-1333
Sally JonesDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-0013-8865
Melanie MendelDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-2409-7479
Jack StubbsDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-3788-1687
Clare E M StevensonDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0001-6695-8201
Josephine H R MaidmentDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-8229-2718
Mark YoulesThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-2953-7533
Rafał ZdrzałekDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0003-3669-924X
Sophien KamounThe Sainsbury Laboratory, University of East Anglia, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0002-0290-0315
Mark J BanfieldDepartment of Biochemistry and Metabolism, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK.ORCID 0000-0001-8921-3835
John Innes Centre · GBUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/M011216/1Biotechnology and Biological Sciences Research Council BB/P012574/1Biotechnology and Biological Sciences Research Council BBS/E/J/000PR9795European Research Council 743165
6 · The paper itself

Abstract

Engineering the plant immune system offers genetic solutions to mitigate crop diseases caused by diverse agriculturally significant pathogens and pests. Modification of intracellular plant immune receptors of the nucleotide-binding leucine-rich repeat (NLR) receptor superfamily for expanded recognition of pathogen virulence proteins (effectors) is a promising approach for engineering disease resistance. However, engineering can cause NLR autoactivation, resulting in constitutive defense responses that are deleterious to the plant. This may be due to plant NLRs associating in highly complex signaling networks that coevolve together, and changes through breeding or genetic modification can generate incompatible combinations, resulting in autoimmune phenotypes. The sensor and helper NLRs of the rice (Oryza sativa) NLR pair Pik have coevolved, and mismatching between noncoevolved alleles triggers constitutive activation and cell death. This limits the extent to which protein modifications can be used to engineer pathogen recognition and enhance disease resistance mediated by these NLRs. Here, we dissected incompatibility determinants in the Pik pair in Nicotiana benthamiana and found that heavy metal-associated (HMA) domains integrated in Pik-1 not only evolved to bind pathogen effectors but also likely coevolved with other NLR domains to maintain immune homeostasis. This explains why changes in integrated domains can lead to autoactivation. We then used this knowledge to facilitate engineering of new effector recognition specificities, overcoming initial autoimmune penalties. We show that by mismatching alleles of the rice sensor and helper NLRs Pik-1 and Pik-2, we can enable the integration of synthetic domains with novel and enhanced recognition specificities. Taken together, our results reveal a strategy for engineering NLRs, which has the potential to allow an expanded set of integrations and therefore new disease resistance specificities in plants.

Indexed as

Disease ResistancePlant ProteinsAllelesPlant DiseasesPlant ImmunityPlantsPlant Proteins

Identifiers

PMID37486356
PMCPMC10533329
OpenAlexW4385186561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.