Evidence map›Paper›PMID 37486226›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2023

Molecular Mechanisms of Lupus Susceptibility Allele PBX1D.

Yuk Pheel Park, Tracoyia Roach, Sujung Soh, Leilani Zeumer-Spataro, Seung-Chul Choi, David A Ostrov, Young Yang, Laurence Morel

Abstract read
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Lupus susceptibility geneScience advances · 2024
    Article
  2. PBX1: a TALE of two seasons-key roles during development and in cancer.Frontiers in cell and developmental biology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuk Pheel ParkDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health, San Antonio, TX.ORCID 0000-0001-9749-5983
Tracoyia RoachDepartment of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL.
Sujung SohResearch Institute of Women's Health, Sookmyung Women's University, Yongsan-Gu, Seoul, South Korea.ORCID 0000-0001-9576-6524
Leilani Zeumer-SpataroDepartment of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL.
Seung-Chul ChoiDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health, San Antonio, TX.
David A OstrovDepartment of Pathology, Immunology and Laboratory Medicine, College of Medicine, University of Florida, Gainesville, FL.ORCID 0000-0002-4696-875X
Young YangResearch Institute of Women's Health, Sookmyung Women's University, Yongsan-Gu, Seoul, South Korea.ORCID 0000-0003-4239-0804
Laurence MorelDepartment of Microbiology, Immunology, and Molecular Genetics, University of Texas Health, San Antonio, TX.

Funding

Characterization of SLE-susceptibility loci on mouse chromosome 1R01AI045050 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Laurence Morel · 2000 to 2026
$11.5M
NIAID NIH HHS R01 AI045050
6 · The paper itself

Abstract

Pre-B cell leukemia homeobox 1 (PBX1) controls chromatin accessibility to a large number of genes in various cell types. Its dominant negative splice isoform, PBX1D, which lacks the DNA and Hox-binding domains, is expressed more frequently in the CD4+ T cells from lupus-prone mice and patients with systemic lupus erythematosus than healthy control subjects. PBX1D overexpression in CD4+ T cells impaired regulatory T cell homeostasis and expanded inflammatory CD4+ T cells. In this study, we showed that PBX1 message expression is downregulated by activation in CD4+ T cells as well as in B cells. PBX1D protein was less stable than the normal isoform, PBX1B, and it is degraded through the ubiquitin-proteasome-dependent pathway. The DNA binding domain lacking in PBX1D has two putative ubiquitin binding sites, K292 and K293, that are predicted to be in direct contact with DNA. Mutation of K292-293 reduced PBX1B stability to a level similar to PBX1D and abrogated DNA binding. In addition, contrary to PBX1B, PBX1D is retained in the cytoplasm without the help of the cofactors MEIS or PREP1, indicating a different requirement for nuclear translocation. Overall, these findings suggest that multiple post-transcriptional mechanisms are responsible for PBX1D loss of function and induction of CD4+ T cell inflammatory phenotypes in systemic lupus erythematosus.

Indexed as

Homeodomain ProteinsLupus Erythematosus, SystemicAllelesAnimalsDNAMicePre-B-Cell Leukemia Transcription Factor 1Protein IsoformsUbiquitinsDNAHomeodomain ProteinsPre-B-Cell Leukemia Transcription Factor 1Protein IsoformsUbiquitins

Identifiers

PMID37486226
PMCPMC10530199

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.