Evidence map›Paper›PMID 37486105›Full record

ArticleeLife2023

Uncovering circuit mechanisms of current sinks and sources with biophysical simulations of primary visual cortex.

Atle E Rimehaug, Alexander J Stasik, Espen Hagen, Yazan N Billeh, Josh H Siegle, Kael Dai, Shawn R Olsen, Christof Koch, Gaute T Einevoll, Anton Arkhipov

Abstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed.

  1. Article
  2. Spectral dependence as a framework for neural coordination.Current research in neurobiology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Increased Perceptual Reliability Reduces Membrane Potential Variability in Cortical Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Cortical dynamics of neural-connectivity fields.Journal of computational neuroscience · 2025
    Article
  12. Single Neuron Contributions to the Auditory Brainstem EEG.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  13. A Python toolbox for neural circuit parameter inference.NPJ systems biology and applications · 2025
    Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Large-Scale Mechanistic Models of Brain Circuits with Biophysically and Morphologically Detailed Neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Atle E RimehaugDepartment of Informatics, University of Oslo, Oslo, Norway.ORCID https://orcid.org/0000-0002-8312-9875
Alexander J StasikDepartment of Physics, University of Oslo, Oslo, Norway.ORCID https://orcid.org/0000-0003-1646-2472
Espen HagenDepartment of Physics, University of Oslo, Oslo, Norway.
Yazan N BillehMindScope Program, Allen Institute, Seattle, United States.
Josh H SiegleMindScope Program, Allen Institute, Seattle, United States.ORCID https://orcid.org/0000-0002-7736-4844
Kael DaiMindScope Program, Allen Institute, Seattle, United States.
Shawn R OlsenMindScope Program, Allen Institute, Seattle, United States.ORCID https://orcid.org/0000-0002-9568-7057
Christof KochMindScope Program, Allen Institute, Seattle, United States.
Gaute T EinevollDepartment of Physics, University of Oslo, Oslo, Norway.ORCID https://orcid.org/0000-0002-5425-5012
Anton ArkhipovMindScope Program, Allen Institute, Seattle, United States.ORCID https://orcid.org/0000-0003-1106-8310

Funding

Cell Type and Circuit Mechanisms of Non-Invasive Brain Stimulation by Sensory EntrainmentR01NS122742 · NINDS · ALLEN INSTITUTE · PI ANTON ARKHIPOV, Li-Huei Tsai · 2021 to 2026
$4.1M
Modeling the structure-function relation in a reconstructed cortical tissueR01EB029813 · NIBIB · ALLEN INSTITUTE · PI ARKHIPOV, ANTON, MIHALAS, STEFAN · 2020 to 2020
$1.3M
NIBIB NIH HHS R01 EB029813NIBIB NIH HHS R01EB029813NINDS NIH HHS R01 NS122742NINDS NIH HHS R01NS122742
6 · The paper itself

Abstract

Local field potential (LFP) recordings reflect the dynamics of the current source density (CSD) in brain tissue. The synaptic, cellular, and circuit contributions to current sinks and sources are ill-understood. We investigated these in mouse primary visual cortex using public Neuropixels recordings and a detailed circuit model based on simulating the Hodgkin-Huxley dynamics of >50,000 neurons belonging to 17 cell types. The model simultaneously captured spiking and CSD responses and demonstrated a two-way dissociation: firing rates are altered with minor effects on the CSD pattern by adjusting synaptic weights, and CSD is altered with minor effects on firing rates by adjusting synaptic placement on the dendrites. We describe how thalamocortical inputs and recurrent connections sculpt specific sinks and sources early in the visual response, whereas cortical feedback crucially alters them in later stages. These results establish quantitative links between macroscopic brain measurements (LFP/CSD) and microscopic biophysics-based understanding of neuron dynamics and show that CSD analysis provides powerful constraints for modeling beyond those from considering spikes.

Indexed as

NeuronsPrimary Visual CortexAnimalsBrainMiceModels, Neurologicalcomputational biologycurrent source densityexperimental validationlarge-scale biophysically detailed network modellocal field potentialmouseneurosciencespikessystems biology

Identifiers

PMID37486105
PMCPMC10393295

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.